RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 KLF11O14901 512 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 LSM1O15116 133 aaKnown RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 TOM1L1O75674 476 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 TMED10P49755 219 aaKnown RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 GDF10P55107 478 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 RPL26P61254 145 aaKnown RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 GSTO1P78417 241 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 PSMD6Q15008 389 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 RARS2Q5T160 578 aaKnown RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 NANOGNBQ7Z5D8 188 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 PDIK1LQ8N165 341 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 PPM1NQ8N819 430 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 RNF169Q8NCN4 708 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 FAM81BQ96LP2 452 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 COPS7BQ9H9Q2 264 aaPredicted RBP12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
SCAMP2-204ENST00000563829 MEIS2O14770 477 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 BIRC5O15392 142 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 TLR3O15455 904 aaKnown RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 GSTT2P0CG29 244 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 GSTT2BP0CG30 244 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 MRPS22P82650 360 aaKnown RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 CDKL1Q00532 357 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 SLC18A2Q05940 514 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 PGM2L1Q6PCE3 622 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 PPIL6Q8IXY8 311 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 DEPTORQ8TB45 409 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 ZNF512Q96ME7 567 aaPredicted RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 OSBPL6Q9BZF3 934 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 PAIP1Q9H074 479 aaKnown RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 TOPORSQ9NS56 1045 aaPredicted RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 FETUBQ9UGM5 382 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 RAB26Q9ULW5 256 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 APOBEC2Q9Y235 224 aaKnown RBP12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 COQ6Q9Y2Z9 468 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 TRIM17Q9Y577 477 aa12.83□□□□□ -0.35
SCAMP2-204ENST00000563829 SNHG28P0DPA3 235 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 ELK3P41970 407 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 BASP1P80723 227 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 PDAP1Q13442 181 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 APOFQ13790 326 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 BMPR2Q13873 1038 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TGFBIQ15582 683 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TMEM110Q86TL2 294 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 FBXW8Q8N3Y1 598 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 XXYLT1Q8NBI6 393 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TSPAN14Q8NG11 270 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 HELQQ8TDG4 1101 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 ACTRT2Q8TDY3 377 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 NT5C1BQ96P26 610 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 GPR101Q96P66 508 aaPredicted RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 XPO7Q9UIA9 1087 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 SSX2IPQ9Y2D8 614 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 SPTLC1O15269 473 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 P4HA2O15460 535 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TOP3BO95985 862 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 IL1BP01584 269 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 WEE2P0C1S8 567 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 UNGP13051 313 aaPredicted RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 NFKBIAP25963 317 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 SLC5A3P53794 718 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 PTP4A2Q12974 167 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 STX3Q13277 289 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 SH2D5Q6ZV89 423 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 CCDC33Q8N5R6 958 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TAS1R2Q8TE23 839 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 COX4I2Q96KJ9 171 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 MBOAT7Q96N66 472 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 SLITRK1Q96PX8 696 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 PCDH9Q9HC56 1237 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 PSMD13Q9UNM6 376 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 PLLPQ9Y342 182 aa12.83□□□□□ -0.36
SCAMP2-204ENST00000563829 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 FUOMA2VDF0 154 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 H0YIN7 160 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 ADAM23O75077 832 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 SIN3BO75182 1162 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 TMEM63AO94886 807 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 OCM2P0CE71 109 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 OCMP0CE72 109 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 ITGAXP20702 1163 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 PAX3P23760 479 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 NRLP54845 237 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 PPP4CP60510 307 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 PFKPQ01813 784 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 ATP1A4Q13733 1029 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms