RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FBXO22Q8NEZ5 403 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 PHOSPHO2Q8TCD6 241 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 NDRG1Q92597 394 aaKnown RBP23.01■■□□□ 1.27
LINC01960-201ENST00000563759 KHSRPQ92945 711 aaKnown RBP eCLIP23.01■■□□□ 1.27
LINC01960-201ENST00000563759 CFAP57Q96MR6 1250 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 RAD9AQ99638 391 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 PLVAPQ9BX97 442 aa23.01■■□□□ 1.27
LINC01960-201ENST00000563759 UQCRHLA0A096LP55 91 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 CCDC85CA6NKD9 419 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 PGRMC1O00264 195 aaKnown RBP23■■□□□ 1.27
LINC01960-201ENST00000563759 DPYSL4O14531 572 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 TRIM66O15016 1216 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 LRCH4O75427 683 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 ZBED1O96006 694 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 UQCRHP07919 91 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 USP17L7P0C7H9 530 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 ARCQ7LC44 396 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 DDX53Q86TM3 631 aaKnown RBP23■■□□□ 1.27
LINC01960-201ENST00000563759 ATAD1Q8NBU5 361 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 SPPL2BQ8TCT7 592 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 BACE2Q9Y5Z0 518 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 PLXNA3P51805 1871 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 MTMR11A4FU01 709 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 URODP06132 367 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 TCF4P15884 667 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 RPL17P18621 184 aaKnown RBP23■■□□□ 1.27
LINC01960-201ENST00000563759 TERF1P54274 439 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 DAOAP59103 153 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 ATP11AP98196 1134 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 C15orf59Q2T9L4 293 aaPredicted RBP23■■□□□ 1.27
LINC01960-201ENST00000563759 ZFYVE27Q5T4F4 411 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 RNF19BQ6ZMZ0 732 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 ACTRT1Q8TDG2 376 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 RPGRIP1Q96KN7 1286 aa23■■□□□ 1.27
LINC01960-201ENST00000563759 TADA3O75528 432 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 DAB1O75553 588 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 MAGEA11P43364 429 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 SLC5A3P53794 718 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 YWHAZP63104 245 aaKnown RBP22.99■■□□□ 1.27
LINC01960-201ENST00000563759 ROR1Q01973 937 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 DSG1Q02413 1049 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 KRT17Q04695 432 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 IFRD2Q12894 506 aaPredicted RBP22.99■■□□□ 1.27
LINC01960-201ENST00000563759 HADHQ16836 314 aaKnown RBP22.99■■□□□ 1.27
LINC01960-201ENST00000563759 SLC8B1Q6J4K2 584 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 TTC9BQ8N6N2 239 aa22.99■■□□□ 1.27
LINC01960-201ENST00000563759 C2orf15Q8WU43 125 aaKnown RBP22.99■■□□□ 1.27
LINC01960-201ENST00000563759 NGRNQ9NPE2 291 aaKnown RBP22.99■■□□□ 1.27
LINC01960-201ENST00000563759 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.99■■□□□ 1.27
LINC01960-201ENST00000563759 EFCAB8A8MWE9 144 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 GLI1P08151 1106 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 OR1D2P34982 312 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 CCDC14Q49A88 953 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 COL13A1Q5TAT6 717 aaPredicted RBP22.98■■□□□ 1.27
LINC01960-201ENST00000563759 LRRC38Q5VT99 294 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 VPS52Q8N1B4 723 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 RASGEF1CQ8N431 466 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 GOLGA1Q92805 767 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 CLP1Q92989 425 aaKnown RBP22.98■■□□□ 1.27
LINC01960-201ENST00000563759 SEPT5Q99719 369 aaPredicted RBP22.98■■□□□ 1.27
LINC01960-201ENST00000563759 POPDC2Q9HBU9 364 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.98■■□□□ 1.27
LINC01960-201ENST00000563759 V9GYY5 206 aaPredicted RBP22.98■■□□□ 1.27
LINC01960-201ENST00000563759 WDR27A2RRH5 827 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 FGF18O76093 207 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 FGGP02679 453 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 DNAJB2P25686 324 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 MATKP42679 507 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 DDR2Q16832 855 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 MGAT5BQ3V5L5 792 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 ODF2Q5BJF6 829 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 TEX35Q5T0J7 233 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 CCDC50Q8IVM0 306 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 KATNAL2Q8IYT4 538 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 FAM172AQ8WUF8 416 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 STK39Q9UEW8 545 aa22.98■■□□□ 1.27
LINC01960-201ENST00000563759 YJEFN3A6XGL0 299 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 E7ENQ6 273 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 ADAM12O43184 909 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 PYGMP11217 842 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 GTF2F1P35269 517 aaKnown RBP eCLIP22.97■■□□□ 1.27
LINC01960-201ENST00000563759 PTPN9P43378 593 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 SLC25A11Q02978 314 aaKnown RBP22.97■■□□□ 1.27
LINC01960-201ENST00000563759 C2orf54Q08AI8 447 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 SMC1AQ14683 1233 aaKnown RBP22.97■■□□□ 1.27
LINC01960-201ENST00000563759 CLUL1Q15846 466 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 DCAF6Q58WW2 860 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 AADACL2Q6P093 401 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 ZNF572Q7Z3I7 529 aaPredicted RBP22.97■■□□□ 1.27
LINC01960-201ENST00000563759 DEFB106AQ8N104 65 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 ARFGAP1Q8N6T3 406 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 SCAMP5Q8TAC9 235 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 SP7Q8TDD2 431 aaPredicted RBP22.97■■□□□ 1.27
LINC01960-201ENST00000563759 C8orf48Q96LL4 319 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 NAP1L3Q99457 506 aaPredicted RBP22.97■■□□□ 1.27
LINC01960-201ENST00000563759 ZWILCHQ9H900 591 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 KLHL11Q9NVR0 708 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 SLC27A5Q9Y2P5 690 aa22.97■■□□□ 1.27
LINC01960-201ENST00000563759 CAPN9O14815 690 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 LTFP02788 710 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms