RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FOLR3P41439 243 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 PABPC1LQ4VXU2 614 aaKnown RBP5.54□□□□□ -1.52
SMG1-206ENST00000562668 LDHAL6AQ6ZMR3 332 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 C15orf52Q6ZUT6 534 aaKnown RBP5.54□□□□□ -1.52
SMG1-206ENST00000562668 NECAB2Q7Z6G3 386 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 CLNKQ7Z7G1 428 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 RSPH3Q86UC2 560 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 RPAP2Q8IXW5 612 aaPredicted RBP5.54□□□□□ -1.52
SMG1-206ENST00000562668 EXOC6Q8TAG9 804 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 IFI44Q8TCB0 444 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 ZNF384Q8TF68 577 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 VPS33BQ9H267 617 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 ADAMTSL1Q8N6G6 1762 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 ZNF804BA4D1E1 1349 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 MROH5Q6ZUA9 1318 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 COL1A1P02452 1464 aaPredicted RBP5.53□□□□□ -1.52
SMG1-206ENST00000562668 AKAP11Q9UKA4 1901 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 PRAMEF33A0A0G2JMD5 474 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 INO80B-WBP1J3KQ70 363 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 PROM1O43490 865 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 PRAMEF10O60809 474 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 NDUFS2O75306 463 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 RBMXL2O75526 392 aaKnown RBP5.53□□□□□ -1.52
SMG1-206ENST00000562668 AGFG2O95081 481 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 PDE8BO95263 885 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 KCNA2P16389 499 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 IL15P40933 162 aaPredicted RBP5.53□□□□□ -1.52
SMG1-206ENST00000562668 SLC16A1P53985 500 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 KIAA0895LQ68EN5 471 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 VWA1Q6PCB0 445 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 HDAC10Q969S8 669 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 UROC1Q96N76 676 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 MPHOSPH8Q99549 860 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 PACSIN1Q9BY11 444 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 INO80BQ9C086 356 aaPredicted RBP5.53□□□□□ -1.52
SMG1-206ENST00000562668 ANKRD2Q9GZV1 360 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
SMG1-206ENST00000562668 INTS13Q9NVM9 706 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 ASB6Q9NWX5 421 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 NEU2Q9Y3R4 380 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 ZNF609O15014 1411 aa5.53□□□□□ -1.52
SMG1-206ENST00000562668 MYH13Q9UKX3 1938 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 ZNF541Q9H0D2 1346 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 LRRC3CA6NJW4 275 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 YY2O15391 372 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 SGTAO43765 313 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 ORC4O43929 436 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 PROP1O75360 226 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 UFL1O94874 794 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 CD1AP06126 327 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 SBK3P0C264 359 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 C5AR1P21730 350 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 ZNF844Q08AG5 666 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 TFCP2Q12800 502 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 UBE4AQ14139 1066 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 INAVAQ3KP66 663 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 ZNF365Q70YC5 407 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 PEG10Q86TG7 708 aaKnown RBP5.52□□□□□ -1.53
SMG1-206ENST00000562668 CBARPQ8N350 705 aaPredicted RBP5.52□□□□□ -1.53
SMG1-206ENST00000562668 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
SMG1-206ENST00000562668 JADE3Q92613 823 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 FAM84BQ96KN1 310 aaPredicted RBP5.52□□□□□ -1.53
SMG1-206ENST00000562668 SIL1Q9H173 461 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 CNNM1Q9NRU3 951 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 SLC5A4Q9NY91 659 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 JKAMPQ9P055 326 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 CTTNBP2NLQ9P2B4 639 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 SCN4AP35499 1836 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 KAT6AQ92794 2004 aa5.52□□□□□ -1.53
SMG1-206ENST00000562668 CCDC151A5D8V7 595 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 MPPED1O15442 326 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 PPIP5K2O43314 1243 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 ECE2O60344 883 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 MT-CO1P00395 513 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 IL1R1P14778 569 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 MAPK10P53779 464 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 RPS7P62081 194 aaKnown RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 IRX6P78412 446 aaPredicted RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 CXCL9Q07325 125 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 HDAC1Q13547 482 aaPredicted RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 RAB39AQ14964 217 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 AKNAD1Q5T1N1 836 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 UTP14CQ5TAP6 766 aaKnown RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 PGM2L1Q6PCE3 622 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 GRASPQ7Z6J2 395 aaPredicted RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 TDRD7Q8NHU6 1098 aaKnown RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 KLHL32Q96NJ5 620 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 CHMP4BQ9H444 224 aaKnown RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 DCTPP1Q9H773 170 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 DBNDD1Q9H9R9 158 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 GPR108Q9NPR9 543 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 MKS1Q9NXB0 559 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 ARPP21Q9UBL0 812 aaPredicted RBP5.51□□□□□ -1.53
SMG1-206ENST00000562668 EXOC6BQ9Y2D4 811 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 PCDHA13Q9Y5I0 950 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 DOCK2Q92608 1830 aa5.51□□□□□ -1.53
SMG1-206ENST00000562668 MYO5AQ9Y4I1 1855 aaKnown RBP5.5□□□□□ -1.53
SMG1-206ENST00000562668 A0A1B0GUL7 405 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 GLTPD2A6NH11 291 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms