RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TAZQ16635 292 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 UPP1Q16831 310 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 LONRF2Q1L5Z9 754 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 TCTN1Q2MV58 587 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 GOLGA7BQ2TAP0 167 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 LRRC38Q5VT99 294 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PMF1Q6P1K2 205 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 DNAJC24Q6P3W2 148 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 MTERF4Q7Z6M4 381 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 JAZF1Q86VZ6 243 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SLC13A5Q86YT5 568 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 FAM126BQ8IXS8 530 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 KATNAL2Q8IYT4 538 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 UBL4BQ8N7F7 174 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 AENQ8WTP8 325 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 C18orf8Q96DM3 657 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PIWIL1Q96J94 861 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 KRT12Q99456 494 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 RTP3Q9BQQ7 232 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PAAF1Q9BRP4 392 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 AP1M1Q9BXS5 423 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SEZ6LQ9BYH1 1024 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 UBXN6Q9BZV1 441 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SLITRK6Q9H5Y7 841 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PCDH12Q9NPG4 1184 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 STARD7Q9NQZ5 370 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SLC38A7Q9NVC3 462 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 STIM2Q9P246 746 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 WDR35Q9P2L0 1181 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 IP6K2Q9UHH9 426 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 LCMT1Q9UIC8 334 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 CDV3Q9UKY7 258 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 LTBP2Q14767 1821 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 COL4A4P53420 1690 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ZSCAN5CA6NGD5 496 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 C3orf70A6NLC5 250 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 C2CD4BA6NLJ0 364 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 A8MXQ7 604 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 E5RJQ4 531 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 KRIT1O00522 736 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PODXLO00592 558 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CYB561D2O14569 222 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PAPSS1O43252 624 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 NBNO60934 754 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ATP2C2O75185 946 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 EOMESO95936 686 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CYP11A1P05108 521 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 RARAP10276 462 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 SKIP12755 728 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CCDC130P13994 396 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 IL1R2P27930 398 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PTPN7P35236 360 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CLCNKBP51801 687 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TBX4P57082 545 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 SLC25A11Q02978 314 aaKnown RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 DSC1Q08554 894 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 VAC14Q08AM6 782 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PIGHQ14442 188 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TRADDQ15628 312 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CLUL1Q15846 466 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CCDC142Q17RM4 750 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TIGD5Q53EQ6 642 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CLLU1OSQ5K130 101 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 WSCD1Q658N2 575 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TXNRD3NBQ6F5E7 133 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 C8orf74Q6P047 294 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TTC27Q6P3X3 843 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TMCO3Q6UWJ1 677 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 OLFML1Q6UWY5 402 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 FAM183BPQ6ZVS7 135 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CYP4V2Q6ZWL3 525 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 NECAB2Q7Z6G3 386 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 RHOT1Q8IXI2 618 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 HACE1Q8IYU2 909 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ADGRF2Q8IZF7 708 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 FUKQ8N0W3 1084 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 EIF1ADQ8N9N8 165 aaKnown RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ANKRD52Q8NB46 1076 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 APPL2Q8NEU8 664 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TET1Q8NFU7 2136 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 OR6B3Q8NGW1 331 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 EXD1Q8NHP7 514 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CASKIN2Q8WXE0 1202 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 VWCEQ96DN2 955 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 SENP8Q96LD8 212 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 MCEEQ96PE7 176 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PKMYT1Q99640 499 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 HNRNPABQ99729 332 aaKnown RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 DDX47Q9H0S4 455 aaKnown RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 C11orf49Q9H6J7 331 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 RSAD1Q9HA92 442 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ARFGAP3Q9NP61 516 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 UBN1Q9NPG3 1134 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CRTAC1Q9NQ79 661 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms