RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 KRT4P19013 534 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 SERPINB6P35237 376 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 C21orf59P57076 290 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 MAP1SQ66K74 1059 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-206ENST00000561781 SPOPLQ6IQ16 392 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 IYDQ6PHW0 289 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 DCLRE1AQ6PJP8 1040 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 PLEKHA8Q96JA3 519 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 PLVAPQ9BX97 442 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 MAK16Q9BXY0 300 aaKnown RBP19.37■□□□□ 0.69
RAB40C-206ENST00000561781 PAIP1Q9H074 479 aaKnown RBP19.37■□□□□ 0.69
RAB40C-206ENST00000561781 CCDC68Q9H2F9 335 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 VTA1Q9NP79 307 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 SLC24A2Q9UI40 661 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 MAST2Q6P0Q8 1798 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 ALDH1A3P47895 512 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 PCYT1AP49585 367 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 NSUN2Q08J23 767 aaKnown RBP eCLIP19.37■□□□□ 0.69
RAB40C-206ENST00000561781 ZNF746Q6NUN9 644 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-206ENST00000561781 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 HHIPL2Q6UWX4 724 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 MRRFQ96E11 262 aaKnown RBP19.37■□□□□ 0.69
RAB40C-206ENST00000561781 CNBD2Q96M20 576 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 NUF2Q9BZD4 464 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 ARMC7Q9H6L4 198 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 MKNK2Q9HBH9 465 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 PALMDQ9NP74 551 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 KCNK4Q9NYG8 393 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 FZD1Q9UP38 647 aa19.37■□□□□ 0.69
RAB40C-206ENST00000561781 TMEM114B3SHH9 223 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 CYP26A1O43174 497 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 CRTAMO95727 393 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 C6orf222P0C671 652 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PLS3P13797 630 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 RAG1P15918 1043 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 POLR2EP19388 210 aaKnown RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 GSSP48637 474 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 TNNI2P48788 182 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 CCNIQ14094 377 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 DCAF6Q58WW2 860 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 ANKS1BQ7Z6G8 1248 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 ALYREFQ86V81 257 aaKnown RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 ZBED3Q96IU2 234 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 LIN28AQ9H9Z2 209 aaKnown RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PRELID1Q9Y255 219 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 AP4B1Q9Y6B7 739 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 ESYT2A0FGR8 921 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 C2orf71A6NGG8 1288 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 ADM5C9JUS6 153 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 FOXN3O00409 490 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PFDN6O15212 129 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 POLR2MP0CAP2 368 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 FMO5P49326 533 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 SLC12A3P55017 1021 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PSMC1P62191 440 aaKnown RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PDE1CQ14123 709 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PRKD1Q15139 912 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 RABGAP1LQ5R372 815 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 FAAH2Q6GMR7 532 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 MAPKAPK5Q8IW41 473 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 TRIML2Q8N7C3 387 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 TGFBRAP1Q8WUH2 860 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 PSMC3IPQ9P2W1 217 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-206ENST00000561781 APEX2Q9UBZ4 518 aa19.36■□□□□ 0.69
RAB40C-206ENST00000561781 ATP5BP06576 529 aaKnown RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 ENDOUP21128 410 aaKnown RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 SLC5A3P53794 718 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 KCNA1Q09470 495 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 CBWD6Q4V339 395 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 CBWD3Q5JTY5 395 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 CBWD5Q5RIA9 395 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 CATSPER1Q8NEC5 780 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 PSPC1Q8WXF1 523 aaKnown RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 NACC2Q96BF6 587 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 ALKBH8Q96BT7 664 aaKnown RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 C6orf203Q9P0P8 240 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 PPARGC1AQ9UBK2 798 aaKnown RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 ZNF70Q9UC06 446 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 PRDX6P30041 224 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 ALDH3B2P48448 385 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 HSPA13P48723 471 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 GSTO1P78417 241 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 PAOXQ6QHF9 649 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 POU5F2Q8N7G0 328 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 CCDC127Q96BQ5 260 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 COA7Q96BR5 231 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 CLK4Q9HAZ1 481 aaKnown RBP19.35■□□□□ 0.69
RAB40C-206ENST00000561781 RABL2BQ9UNT1 228 aa19.35■□□□□ 0.69
RAB40C-206ENST00000561781 TNFRSF10AO00220 468 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 ZBTB11O95625 1053 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-206ENST00000561781 STAMBPO95630 424 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 CIITAP33076 1130 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 PHKG1Q16816 387 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 IZUMO3Q5VZ72 239 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 ISLR2Q6UXK2 745 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 FASTKD5Q7L8L6 764 aaKnown RBP19.34■□□□□ 0.69
RAB40C-206ENST00000561781 PRPF39Q86UA1 669 aaKnown RBP19.34■□□□□ 0.69
RAB40C-206ENST00000561781 C11orf74Q86VG3 221 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 CHSY1Q86X52 802 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms