RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 HOXA3O43365 443 aaPredicted RBP4.93□□□□□ -1.62
TMOD3-207ENST00000560549 FAM20BO75063 409 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 PEX11BO96011 259 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 MTHFD2P13995 350 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 RXRAP19793 462 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 PDCP20941 246 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 ZFP36P26651 326 aaKnown RBP4.93□□□□□ -1.62
TMOD3-207ENST00000560549 MCM5P33992 734 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 MALLQ13021 153 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 GTF2H3Q13889 308 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 GRM3Q14832 879 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 ANO4Q32M45 955 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 C3orf36Q3SXR2 165 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 COBLL1Q53SF7 1204 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 CCDC183Q5T5S1 534 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 NAA16Q6N069 864 aaPredicted RBP4.93□□□□□ -1.62
TMOD3-207ENST00000560549 XYLT1Q86Y38 959 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 GLB1L2Q8IW92 636 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 RSAD2Q8WXG1 361 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 HOXB13Q92826 284 aaPredicted RBP4.93□□□□□ -1.62
TMOD3-207ENST00000560549 ARL8AQ96BM9 186 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 TAAR9Q96RI9 348 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 PPP1R9BQ96SB3 815 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 RIOK1Q9BRS2 568 aaKnown RBP4.93□□□□□ -1.62
TMOD3-207ENST00000560549 NYXQ9GZU5 481 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 MMRN2Q9H8L6 949 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 LY9Q9HBG7 655 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 GTF2A1LQ9UNN4 478 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 ATP6V1DQ9Y5K8 247 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 SLC4A4Q9Y6R1 1079 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 BCORQ6W2J9 1755 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 A6NNZ2 444 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 PRRT4C9JH25 899 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 RANBP6O60518 1105 aaKnown RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 POU2F2P09086 479 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 CYP2D6P10635 497 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 GYS1P13807 737 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 CTSSP25774 331 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 CYP2C19P33261 490 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 MCM7P33993 719 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 RFC4P35249 363 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 SLC5A3P53794 718 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 KIF23Q02241 960 aaPredicted RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 DDR1Q08345 913 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 MRPL49Q13405 166 aaKnown RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 FHL2Q14192 279 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ANO1Q5XXA6 986 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ANKS6Q68DC2 871 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 PRR5LQ6MZQ0 368 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 MFSD5Q6N075 450 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 Q6ZPA2 131 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF627Q7L945 461 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 PRR18Q8N4B5 295 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 GLB1L3Q8NCI6 653 aaPredicted RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 OR5M3Q8NGP4 307 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 SDR42E1Q8WUS8 393 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ST8SIA2Q92186 375 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 LARP4BQ92615 738 aaKnown RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 LRGUKQ96M69 825 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 USP28Q96RU2 1077 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ACE2Q9BYF1 805 aaPredicted RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 TSPY26PQ9H489 355 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 GOLPH3LQ9H4A5 285 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 RAI14Q9P0K7 980 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ORC3Q9UBD5 711 aaPredicted RBP4.92□□□□□ -1.62
TMOD3-207ENST00000560549 ABCF2Q9UG63 623 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 TRPS1Q9UHF7 1281 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 PGAP2Q9UHJ9 254 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 RCOR1Q9UKL0 485 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 PHTF1Q9UMS5 762 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 WDR19Q8NEZ3 1342 aa4.92□□□□□ -1.62
TMOD3-207ENST00000560549 CARMIL3Q8ND23 1372 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 ARAP2Q8WZ64 1704 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 H3BQV1 296 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 NRP1O14786 923 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 AP5Z1O43299 807 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 HTRA2O43464 458 aaPredicted RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 TIMM44O43615 452 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 NRP2O60462 931 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 PRAMEF4O60810 478 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 LTA4HP09960 611 aaKnown RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 GUCY1A2P33402 732 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CASP2P42575 452 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 WASP42768 502 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 GPSM2P81274 684 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 HMGN5P82970 282 aaKnown RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 MECOMQ03112 1051 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CEBPZQ03701 1054 aaKnown RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 DUSP2Q05923 314 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 DPTQ07507 201 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CHAF1AQ13111 956 aaPredicted RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 GRAPQ13588 217 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 KCTD2Q14681 263 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 SEPT2Q15019 361 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 ATAT1Q5SQI0 421 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 AKNAD1Q5T1N1 836 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 NAIF1Q69YI7 327 aaPredicted RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CTR9Q6PD62 1173 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CCDC174Q6PII3 467 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms