RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	NUP88	Q99567	741 aa	Predicted RBP	4.41	□□□□□ -1.7
SLTM-223	ENST00000560532	DTNB	O60941	627 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	GRP	P07492	148 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	ADORA2A	P29274	412 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	PDE6C	P51160	858 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	PLS1	Q14651	629 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	TTF1	Q15361	905 aa	Predicted RBP	4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	ASIC2	Q16515	512 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	CYP1B1	Q16678	543 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	DEF8	Q6ZN54	512 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	USP45	Q70EL2	814 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	ZNF280B	Q86YH2	543 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	B4GALNT2	Q8NHY0	566 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	BRIX1	Q8TDN6	353 aa	Known RBP	4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	OSCP1	Q8WVF1	389 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	HSPBAP1	Q96EW2	488 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	ZNF479	Q96JC4	524 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	ZFYVE19	Q96K21	471 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	FAM167A	Q96KS9	214 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	MOGAT1	Q96PD6	335 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	MRPL44	Q9H9J2	332 aa	Known RBP	4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	XPR1	Q9UBH6	696 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	PCDHA6	Q9UN73	950 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	SHOC2	Q9UQ13	582 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	PLEKHM1	Q9Y4G2	1056 aa		4.4	□□□□□ -1.71
SLTM-223	ENST00000560532	BTBD19	C9JJ37	291 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	CNOT3	O75175	753 aa	Known RBP	4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	VNN1	O95497	513 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	CSF1R	P07333	972 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	AKAP5	P24588	427 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	MYO1E	Q12965	1108 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	SEC23B	Q15437	767 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	CAND1	Q86VP6	1230 aa	Known RBP	4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	NR2C2AP	Q86WQ0	139 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	RHOBTB2	Q9BYZ6	727 aa		4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	GTPBP4	Q9BZE4	634 aa	Known RBP	4.39	□□□□□ -1.71
SLTM-223	ENST00000560532	PRKCB	P05771	671 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	NGFR	P08138	427 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	CTSA	P10619	480 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	VCAM1	P19320	739 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	TNFRSF1B	P20333	461 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	VIPR2	P41587	438 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	RPS13	P62277	151 aa	Known RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	NKX6-1	P78426	367 aa	Predicted RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	PSG6	Q00889	435 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	SATB1	Q01826	763 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	CFHR1	Q03591	330 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	PIN1	Q13526	163 aa	Predicted RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	KHDC1L	Q5JSQ8	128 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	TMTC4	Q5T4D3	741 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	EMC10	Q5UCC4	262 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	FBXL22	Q6P050	247 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	CATIP	Q7Z7H3	387 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	CELF5	Q8N6W0	485 aa	Known RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	ASB5	Q8WWX0	329 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	DNASE2B	Q8WZ79	361 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	SLC35A4	Q96G79	324 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	PRR25	Q96S07	402 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	CXorf36	Q9H7Y0	433 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	AASDHPPT	Q9NRN7	309 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	IP6K2	Q9UHH9	426 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	ANKRD6	Q9Y2G4	727 aa		4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
SLTM-223	ENST00000560532	E2F8	A0AVK6	867 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	PRSS47	A8MTI9	375 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	AKAP10	O43572	662 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	IL33	O95760	270 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	IGKV3-20	P01619	116 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	PF4V1	P10720	104 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	MYCL	P12524	364 aa	Predicted RBP	4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	LRPAP1	P30533	357 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	RAB27A	P51159	221 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	UCP3	P55916	312 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	HILS1	P60008	231 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	MTX1	Q13505	466 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	PGS1	Q32NB8	556 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	ATAT1	Q5SQI0	421 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	ANO7	Q6IWH7	933 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	IZUMO1	Q8IYV9	350 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	ABRA	Q8N0Z2	381 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	MMP21	Q8N119	569 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	TMEM255B	Q8WV15	326 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	TMEM204	Q9BSN7	226 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	SLC12A5	Q9H2X9	1139 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	SARS2	Q9NP81	518 aa	Known RBP	4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	THRAP3	Q9Y2W1	955 aa	Known RBP	4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	SNX14	Q9Y5W7	946 aa		4.37	□□□□□ -1.71
SLTM-223	ENST00000560532	SERINC4	A6NH21	518 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	FGA	P02671	866 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	TNFRSF8	P28908	595 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	EPHB1	P54762	984 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	KRT17	Q04695	432 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	ZIK1	Q3SY52	487 aa	Predicted RBP	4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	TMEM65	Q6PI78	240 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	LIX1L	Q8IVB5	337 aa		4.36	□□□□□ -1.71
SLTM-223	ENST00000560532	SIRT6	Q8N6T7	355 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms