RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 ORC1Q13415 861 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 PLK5Q496M5 336 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 ZNF667Q5HYK9 610 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 SPOPLQ6IQ16 392 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 CACNA2D4Q7Z3S7 1137 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 RASSF3Q86WH2 238 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 FUKQ8N0W3 1084 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 NUP93Q8N1F7 819 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 PHTF2Q8N3S3 785 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 PDZD8Q8NEN9 1154 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 USP33Q8TEY7 942 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 FBXO32Q969P5 355 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 SMARCD1Q96GM5 515 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 ZC3H10Q96K80 434 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 SLITRK1Q96PX8 696 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 DUSP15Q9H1R2 295 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 ARRDC1-AS1Q9H2J1 176 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 SMOC1Q9H4F8 434 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 DMAP1Q9NPF5 467 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 KRT82Q9NSB4 513 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 IL37Q9NZH6 218 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 EBF1Q9UH73 591 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 CFAP45Q9UL16 551 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 ZDHHC9Q9Y397 364 aa10.78□□□□□ -0.68
SNRPA1-212ENST00000560496 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 FAM237AA0A1B0GTK4 181 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 PDXKO00764 312 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 DCLK1O15075 740 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 PHACTR2O75167 634 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 BEST1O76090 585 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 RTN3O95197 1032 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 APBB3O95704 486 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 ASS1P00966 412 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 ADRB1P08588 477 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 ZDHHC11BP0C7U3 371 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 YWHAQP27348 245 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 MPLP40238 635 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 EIF2DP41214 584 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 PGFP49763 221 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 TUBP50607 506 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 LIMK1P53667 647 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 SEC13P55735 322 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 DHCR24Q15392 516 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 SNX30Q5VWJ9 437 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 GPRIN1Q7Z2K8 1008 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 DDX42Q86XP3 938 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 SPRYD3Q8NCJ5 442 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 MDGA1Q8NFP4 955 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 WBP2Q969T9 261 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 EXOC4Q96A65 974 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 SMOQ99835 787 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 DUSP9Q99956 384 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 TPSD1Q9BZJ3 242 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 CCSER2Q9H7U1 834 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 CSNK1G1Q9HCP0 422 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 GMIPQ9P107 970 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 CFAP97Q9P2B7 532 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 MMP17Q9ULZ9 603 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 TRAF3IP3Q9Y228 551 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 PCDHGA5Q9Y5G8 931 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 ATP8B3O60423 1300 aa10.77□□□□□ -0.69
SNRPA1-212ENST00000560496 PCDH15Q96QU1 1955 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 FOXD2O60548 495 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 AP1G2O75843 785 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 RHOBTB3O94955 611 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ABL1P00519 1130 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 MYL1P05976 194 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ZNF806P0C7X5 589 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 MBL2P11226 248 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ADH5P11766 374 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 CMA1P23946 247 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 PIK3CAP42336 1068 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 KIR2DL1P43626 348 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 NDUFA8P51970 172 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 NDST1P52848 882 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 KDSRQ06136 332 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 INCA1Q0VD86 236 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 NR1H3Q13133 447 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 PSMD2Q13200 908 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 NFIL3Q16649 462 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 AASDHQ4L235 1098 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ZCWPW2Q504Y3 356 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 PPM1JQ5JR12 505 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 PMS2CLQ68D20 193 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 RHBDF2Q6PJF5 856 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 SV2AQ7L0J3 742 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ACOT1Q86TX2 421 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ETFBKMTQ8IXQ9 262 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 ADGRG2Q8IZP9 1017 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 TCEAL3Q969E4 200 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 TNIP3Q96KP6 325 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 CNOT6LQ96LI5 555 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 CNTNAP3BQ96NU0 1288 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 TWNKQ96RR1 684 aa10.76□□□□□ -0.69
SNRPA1-212ENST00000560496 CNTNAP3Q9BZ76 1288 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms