RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SEL1LQ9UBV2 794 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 SLC6A14Q9UN76 642 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 WASF3Q9UPY6 502 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 PCDHB9Q9Y5E1 797 aa11.19□□□□□ -0.62
CDC42BPB-207ENST00000560492 PCNX2A6NKB5 2137 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 F8VP50 259 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 IRF1P10914 325 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 TCF3P15923 654 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 PFKLP17858 780 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 GARTP22102 1010 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 LMO2P25791 158 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 GRIA2P42262 883 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 ANO4Q32M45 955 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 HSF5Q4G112 596 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 RRAGBQ5VZM2 374 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SCARA3Q6AZY7 606 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 LRSAM1Q6UWE0 723 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SLC36A4Q6YBV0 504 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 NUDT18Q6ZVK8 323 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SV2BQ7L1I2 683 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 TRMT11Q7Z4G4 463 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 C12orf40Q86WS4 652 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 GPD1LQ8N335 351 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 CHCHD4Q8N4Q1 142 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 OLIG1Q8TAK6 271 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 CEP76Q8TAP6 659 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 EPSTI1Q96J88 318 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 CBWD1Q9BRT8 395 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 STK17AQ9UEE5 414 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 MBD1Q9UIS9 605 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SIX4Q9UIU6 781 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 SH3BP1Q9Y3L3 701 aa11.18□□□□□ -0.62
CDC42BPB-207ENST00000560492 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 VPS37CA5D8V6 355 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF840PA6NDX5 716 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 H0Y626 953 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 GABRDO14764 452 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 NDUFS2O75306 463 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 TRIM16O95361 564 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 HOXB2P14652 356 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 EIF2DP41214 584 aaKnown RBP11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 PPP3CCP48454 512 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 TNNC1P63316 161 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 SLC7A9P82251 487 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZXDBP98169 803 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 GAD2Q05329 585 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 TAF10Q12962 218 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 ALCAMQ13740 583 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 PREPLQ4J6C6 727 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 LY6G5CQ5SRR4 150 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 FAM171BQ6P995 826 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 SLC23A3Q6PIS1 610 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 DPH6Q7L8W6 267 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 RABEPKQ7Z6M1 372 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 ADGRG2Q8IZP9 1017 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 MINDY1Q8N5J2 469 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 OR2I1PQ8NGU4 316 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 FBXO32Q969P5 355 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 PCED1BQ96HM7 432 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 RNF38Q9H0F5 515 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 CRTAC1Q9NQ79 661 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 INTS13Q9NVM9 706 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 TBC1D14Q9P2M4 693 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 DEC1Q9P2X7 70 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 PILRBQ9UKJ0 227 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 ADAMTS20P59510 1910 aa11.17□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF233A6NK53 670 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 SYPP08247 313 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 DLATP10515 647 aaKnown RBP11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 WARSP23381 471 aaKnown RBP11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 GNL1P36915 607 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 STAT6P42226 847 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 TNFRSF4P43489 277 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 CASP5P51878 434 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF33AQ06730 810 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 SEMA3BQ13214 749 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 SURF1Q15526 300 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 DUOXA2Q1HG44 320 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 PLEKHG6Q3KR16 790 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 RHBDF2Q6PJF5 856 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 C19orf48Q6RUI8 117 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 STXBP4Q6ZWJ1 553 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 BRAPQ7Z569 592 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 OR5B17Q8NGF7 314 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 MYCBPAPQ8TBZ2 947 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 KBTBD7Q8WVZ9 684 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms