RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RHOBTB1O94844 696 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 ADCY5O95622 1261 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 CST3P01034 146 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-214ENST00000560402 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 PTPN1P18031 435 aaKnown RBP14.41□□□□□ -0.1
SMAD3-214ENST00000560402 PXNP49023 591 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-214ENST00000560402 USP46P62068 366 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 PSMD2Q13200 908 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 PLK5Q496M5 336 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 PLA2G2CQ5R387 149 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 NAIF1Q69YI7 327 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-214ENST00000560402 IL31Q6EBC2 164 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 KBTBD6Q86V97 674 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 TMEM174Q8WUU8 243 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 EZH1Q92800 747 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-214ENST00000560402 VPS45Q9NRW7 570 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 NME7Q9Y5B8 376 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 CPQQ9Y646 472 aa14.41□□□□□ -0.1
SMAD3-214ENST00000560402 TPRP12270 2363 aaKnown RBP14.41□□□□□ -0.1
SMAD3-214ENST00000560402 PHACTR2O75167 634 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 CYP17A1P05093 508 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 MSNP26038 577 aaKnown RBP14.4□□□□□ -0.1
SMAD3-214ENST00000560402 MPLP40238 635 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 OPRD1P41143 372 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 MYL6P60660 151 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 TAF10Q12962 218 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 BIRC3Q13489 604 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 ZNF699Q32M78 642 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 HSF5Q4G112 596 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-214ENST00000560402 CT47A1Q5JQC4 288 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-214ENST00000560402 LUZP1Q86V48 1076 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 TSTD1Q8NFU3 115 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 OTUB2Q96DC9 234 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 TNIP3Q96KP6 325 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 DUSP9Q99956 384 aaKnown RBP14.4□□□□□ -0.1
SMAD3-214ENST00000560402 ZNF518BQ9C0D4 1074 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 XYLT2Q9H1B5 865 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 BLZF1Q9H2G9 400 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 SLC39A2Q9NP94 309 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 SERTAD1Q9UHV2 236 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 ACACBO00763 2458 aa14.4□□□□□ -0.1
SMAD3-214ENST00000560402 SDK1Q7Z5N4 2213 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 GDF9O60383 454 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 ADH1CP00326 375 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 P4HA1P13674 534 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 HOXC13P31276 330 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 TUBP50607 506 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 CLDN10P78369 228 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 MRPS21P82921 87 aaKnown RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 ZXDBP98169 803 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 SF3A2Q15428 464 aaKnown RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 ZNF667Q5HYK9 610 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 FAM35AQ86V20 835 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 SLC9A9Q8IVB4 645 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 NUP93Q8N1F7 819 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 USP33Q8TEY7 942 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 ZNF516Q92618 1163 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 FBXO32Q969P5 355 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 CCDC47Q96A33 483 aaKnown RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 SMARCD1Q96GM5 515 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 GTPBP4Q9BZE4 634 aaKnown RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 TRIM5Q9C035 493 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 DUSP15Q9H1R2 295 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 LINC00597Q9H2U6 94 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 DPEP3Q9H4B8 488 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 DMAP1Q9NPF5 467 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 EXOC1Q9NV70 894 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 RMND1Q9NWS8 449 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 COMMD8Q9NX08 183 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 TBC1D14Q9P2M4 693 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
SMAD3-214ENST00000560402 MMP17Q9ULZ9 603 aa14.39□□□□□ -0.11
SMAD3-214ENST00000560402 THADAQ6YHU6 1953 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 CNOT1A5YKK6 2376 aaKnown RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 LRRIQ3A6PVS8 624 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 IKBKBO14920 756 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 ACTN4O43707 911 aaKnown RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 CLSTN1O94985 981 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 MYL1P05976 194 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 MBL2P11226 248 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 TRIM21P19474 475 aaKnown RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 YWHAQP27348 245 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 DGKEP52429 567 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 PNOCQ13519 176 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 CUL4BQ13620 913 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 NCOA4Q13772 614 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 DHCR24Q15392 516 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 GAB4Q2WGN9 574 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 SARM1Q6SZW1 724 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 C11orf57Q6ZUT1 292 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 RASSF3Q86WH2 238 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 MLKLQ8NB16 471 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 PARD3BQ8TEW8 1205 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 CNOT6LQ96LI5 555 aaKnown RBP14.38□□□□□ -0.11
SMAD3-214ENST00000560402 CNTNAP3BQ96NU0 1288 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 B3GNT5Q9BYG0 378 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 CNTNAP3Q9BZ76 1288 aa14.38□□□□□ -0.11
SMAD3-214ENST00000560402 RNF38Q9H0F5 515 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms