RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LRRC74BQ6ZQY2 392 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM210AQ96ND0 272 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCDC115Q96NT0 180 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MYRFQ9Y2G1 1151 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PCP4L1A6NKN8 68 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 TOP3AQ13472 1001 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MRNIPQ6NTE8 343 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MTSS1LQ765P7 747 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MYO1HQ8N1T3 1032 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC20A1Q8WUM9 679 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MMP19Q99542 508 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 TLR7Q9NYK1 1049 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PPIEQ9UNP9 301 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 IQCMA0A1B0GVH7 501 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 A0A1W2PQC6 194 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 VBP1P61758 197 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MROH9Q5TGP6 573 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC13A5Q86YT5 568 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM120BQ96EK7 910 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 HEY2Q9UBP5 337 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 ABCB11O95342 1321 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 H3BN98 237 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 STX16-NPEPL1H3BU86 382 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 STX16O14662 325 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MPOP05164 745 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 GAS2L3Q86XJ1 694 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 KCTD10Q9H3F6 313 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 BAG6P46379 1132 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC22A9Q8IVM8 553 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 AP3S1Q92572 193 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 OTUD5Q96G74 571 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 TAGLN3Q9UI15 199 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAPRE3Q9UPY8 281 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 KIAA0232Q92628 1395 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PDE8BO95263 885 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PARNO95453 639 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PRKAR1AP10644 381 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 CNTFP26441 200 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 RAB25P57735 213 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 XRCC4Q13426 336 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 EFHD2Q96C19 240 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCDC177Q9NQR7 707 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAP10Q9P2G4 905 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 TMEM114B3SHH9 223 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 EFNA5P52803 228 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 BARGINQ6ZT62 677 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 PHTF1Q9UMS5 762 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 WBP11Q9Y2W2 641 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 CBFA2T3O75081 653 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 NEDD8Q15843 81 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 SH2D3CQ8N5H7 860 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 PSMC5P62195 406 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZFP1Q6P2D0 407 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 TDRD5Q8NAT2 981 aaKnown RBP14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 CLHC1Q8NHS4 586 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 OSBPL5Q9H0X9 879 aaPredicted RBP14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 CHKBQ9Y259 395 aa14.27□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM25EA8MYX2 175 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 SUPT7LO94864 414 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 ANXA6P08133 673 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 PTGER2P43116 358 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 GRSF1Q12849 480 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 NAIF1Q69YI7 327 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 CRELD1Q96HD1 420 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 PRKAG3Q9UGI9 489 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 FAM50BQ9Y247 325 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 RBM7Q9Y580 266 aaKnown RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 SNX9Q9Y5X1 595 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 FANCAO15360 1455 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 LMTK3Q96Q04 1460 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 TGM2P21980 687 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 PDHA2P29803 388 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 GCLCP48506 637 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 SCRN3Q0VDG4 424 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 NECAB2Q7Z6G3 386 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 SPATA33Q96N06 139 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 ETAA1Q9NY74 926 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 HAO1Q9UJM8 370 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC16A3O15427 465 aaKnown RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 CYP7B1O75881 506 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 HMBSP08397 361 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 MAGEA2P43356 314 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 ALDH1A3P47895 512 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 KCNJ6P48051 423 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 IZUMO2Q6UXV1 221 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 GPRASP2Q96D09 838 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 FRMD8P1Q9BZ68 369 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 CD4P01730 458 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 LYNP07948 512 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 CEBPAP49715 358 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 CACNA2D1P54289 1103 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 C5orf22Q49AR2 442 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms