RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 JOSD2Q8TAC2 188 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 ATG4AQ8WYN0 398 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 RSPH1Q8WYR4 309 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 ARL8AQ96BM9 186 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 MRPL45Q9BRJ2 306 aaKnown RBP18.66■□□□□ 0.58
SNX1-208ENST00000559844 ATP8A1Q9Y2Q0 1164 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 INSL6Q9Y581 213 aa18.66■□□□□ 0.58
SNX1-208ENST00000559844 GRXCR1A8MXD5 290 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 HMGB1P1B2RPK0 211 aaPredicted RBP18.65■□□□□ 0.58
SNX1-208ENST00000559844 PIRO00625 290 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 TLL1O43897 1013 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 HTRA4P83105 476 aaPredicted RBP18.65■□□□□ 0.58
SNX1-208ENST00000559844 CAV1Q03135 178 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 SOX4Q06945 474 aaPredicted RBP18.65■□□□□ 0.58
SNX1-208ENST00000559844 BTG3Q14201 252 aaPredicted RBP18.65■□□□□ 0.58
SNX1-208ENST00000559844 GOLGA7BQ2TAP0 167 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 DPH6Q7L8W6 267 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 ZNF280BQ86YH2 543 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 TDHQ8IZJ6 230 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 BBOF1Q8ND07 529 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 UBA3Q8TBC4 463 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 CCDC114Q96M63 670 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 GOLGA2P5Q9HBQ8 144 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 HCSTQ9UBK5 93 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 TJP2Q9UDY2 1190 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 ASIC3Q9UHC3 531 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 NFS1Q9Y697 457 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 SCN1AP35498 2009 aa18.65■□□□□ 0.58
SNX1-208ENST00000559844 MYZAPP0CAP1 466 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 TCF4P15884 667 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 RABGGTBP53611 331 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 ATP13A4Q4VNC1 1196 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 TFDP3Q5H9I0 405 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 DRICH1Q6PGQ1 229 aaPredicted RBP18.64■□□□□ 0.58
SNX1-208ENST00000559844 MFSD7Q6UXD7 560 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 CMTR2Q8IYT2 770 aaKnown RBP18.64■□□□□ 0.58
SNX1-208ENST00000559844 SNF8Q96H20 258 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 ATP6V1G3Q96LB4 118 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 FAM193BQ96PV7 902 aaPredicted RBP18.64■□□□□ 0.58
SNX1-208ENST00000559844 RAD9AQ99638 391 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 TMBIM4Q9HC24 238 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 ASNSD1Q9NWL6 643 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 CACNG4Q9UBN1 327 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 EFR3BQ9Y2G0 817 aa18.64■□□□□ 0.58
SNX1-208ENST00000559844 R3HDM2Q9Y2K5 976 aaKnown RBP18.64■□□□□ 0.58
SNX1-208ENST00000559844 NLRC5Q86WI3 1866 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 A6NNZ2 444 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 PI4K2BG5E9Z4 385 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 PPEF2O14830 753 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 RNF8O76064 485 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 DDHD2O94830 711 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 SLC25A11Q02978 314 aaKnown RBP18.64■□□□□ 0.57
SNX1-208ENST00000559844 TUSC3Q13454 348 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 TUBB8Q3ZCM7 444 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 CCHCR1Q8TD31 782 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 TSPYL1Q9H0U9 437 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 PABPC3Q9H361 631 aaKnown RBP18.64■□□□□ 0.57
SNX1-208ENST00000559844 KLHL11Q9NVR0 708 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 HESX1Q9UBX0 185 aa18.64■□□□□ 0.57
SNX1-208ENST00000559844 hCG_1818297A0A087WSY0 165 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 LRRD1A4D1F6 860 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 CASTOR2A6NHX0 329 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 B4GALT3O60512 393 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 LRCH4O75427 683 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 ATF2P15336 505 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 KCTD19Q17RG1 926 aaPredicted RBP18.63■□□□□ 0.57
SNX1-208ENST00000559844 SV2CQ496J9 727 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 FAM102AQ5T9C2 384 aaPredicted RBP18.63■□□□□ 0.57
SNX1-208ENST00000559844 ARHGAP17Q68EM7 881 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 CCDC89Q8N998 374 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 OR6B3Q8NGW1 331 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 GDAP2Q9NXN4 497 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 DNAJB4Q9UDY4 337 aa18.63■□□□□ 0.57
SNX1-208ENST00000559844 KPNA7A9QM74 516 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 TAF6P49848 677 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 DSC1Q08554 894 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 ZNF844Q08AG5 666 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 OR6B2Q6IFH4 312 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 ACOT1Q86TX2 421 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 STK32AQ8WU08 396 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 FRMD8P1Q9BZ68 369 aaPredicted RBP18.62■□□□□ 0.57
SNX1-208ENST00000559844 PRO3102Q9H379 93 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 NRDE2Q9H7Z3 1164 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 LAMA3Q16787 3333 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 A8MXQ7 604 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 NUDT17P0C025 328 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 GPD1P21695 349 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 CDKN2BP42772 138 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 SOWAHAQ2M3V2 549 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 PKDCCQ504Y2 493 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 SPOUT1Q5T280 376 aaKnown RBP18.62■□□□□ 0.57
SNX1-208ENST00000559844 PPP1R26Q5T8A7 1209 aaPredicted RBP18.62■□□□□ 0.57
SNX1-208ENST00000559844 KAZNQ674X7 775 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 ANKS1BQ7Z6G8 1248 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 CROCCP2Q86T23 111 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 COLGALT2Q8IYK4 626 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 EMC1Q8N766 993 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 RAPGEF5Q92565 580 aa18.62■□□□□ 0.57
SNX1-208ENST00000559844 PAAF1Q9BRP4 392 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms