RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 KCNC3Q14003 757 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 ERCC6LQ2NKX8 1250 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 CLEC20AQ6ZU45 233 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 SPATA31D4Q6ZUB0 917 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 PEX26Q7Z412 305 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 TCEAL8Q8IYN2 117 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 TMEM35BQ8NCS4 154 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 ZMIZ2Q8NF64 920 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 HES6Q96HZ4 224 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 CDCA3Q99618 268 aaPredicted RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 NUP85Q9BW27 656 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 CYP4F11Q9HBI6 524 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 RNF14Q9UBS8 474 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 HESX1Q9UBX0 185 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.42■□□□□ 0.38
TPM1-219ENST00000559397 HCFC2Q9Y5Z7 792 aa17.42■□□□□ 0.38
TPM1-219ENST00000559397 V9GYY5 206 aaPredicted RBP17.42■□□□□ 0.38
TPM1-219ENST00000559397 CTAGE15A4D2H0 777 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 CTAGE8P0CG41 777 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 NRIP1P48552 1158 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 BCAT1P54687 386 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 PDE4CQ08493 712 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 TCEAL5Q5H9L2 206 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 Q7L0L9 218 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 CTAGE6Q86UF2 777 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 CTAGE4Q8IX94 777 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 KREMEN2Q8NCW0 462 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 ZNF564Q8TBZ8 553 aaPredicted RBP17.41■□□□□ 0.38
TPM1-219ENST00000559397 UBXN4Q92575 508 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 RPGRIP1Q96KN7 1286 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 KCNK16Q96T55 309 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 ADAM22Q9P0K1 906 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 AMFRQ9UKV5 643 aa17.41■□□□□ 0.38
TPM1-219ENST00000559397 PACSIN2Q9UNF0 486 aaPredicted RBP17.41■□□□□ 0.38
TPM1-219ENST00000559397 PRRC2BQ5JSZ5 2229 aaKnown RBP17.4■□□□□ 0.38
TPM1-219ENST00000559397 TULP2O00295 520 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 SOAT2O75908 522 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 EPCAMP16422 314 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 RRM1P23921 792 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 ELF1P32519 619 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 TUFMP49411 452 aaKnown RBP17.4■□□□□ 0.38
TPM1-219ENST00000559397 GPR15P49685 360 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 MAP3K7CLP57077 242 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 ITIH3Q06033 890 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 BST2Q10589 180 aaKnown RBP17.4■□□□□ 0.38
TPM1-219ENST00000559397 MGAT5BQ3V5L5 792 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 SLC35F5Q8WV83 523 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 ANKRD7Q92527 254 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 PPP2R3CQ969Q6 453 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 CAPZA3Q96KX2 299 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 C8orf48Q96LL4 319 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 CHORDC1Q9UHD1 332 aaPredicted RBP17.4■□□□□ 0.38
TPM1-219ENST00000559397 CYTH4Q9UIA0 394 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 PATJQ8NI35 1801 aa17.4■□□□□ 0.38
TPM1-219ENST00000559397 F8VP50 259 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 XPO1O14980 1071 aaKnown RBP17.39■□□□□ 0.37
TPM1-219ENST00000559397 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 CXCR5P32302 372 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 GRIK1P39086 918 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 HYAL1Q12794 435 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 ELF2Q15723 593 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 LIN9Q5TKA1 542 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 PLEKHA7Q6IQ23 1121 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 VN1R2Q8NFZ6 395 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 HDAC7Q8WUI4 952 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 PBKQ96KB5 322 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 PSMB7Q99436 277 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 SEPT5Q99719 369 aaPredicted RBP17.39■□□□□ 0.37
TPM1-219ENST00000559397 C11orf70Q9BRQ4 267 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 UBXN6Q9BZV1 441 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 PLEKHA4Q9H4M7 779 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 DMAP1Q9NPF5 467 aaPredicted RBP17.39■□□□□ 0.37
TPM1-219ENST00000559397 MAN1C1Q9NR34 630 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 ALG6Q9Y672 507 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 HHLA1C9JL84 531 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 TRIM66O15016 1216 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 ATF6P18850 670 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 PLA2G4AP47712 749 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 DDR2Q16832 855 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 MMS22LQ6ZRQ5 1243 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 SCN4BQ8IWT1 228 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 C1orf131Q8NDD1 294 aaKnown RBP17.39■□□□□ 0.37
TPM1-219ENST00000559397 YIPF1Q9Y548 306 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 CEP83Q9Y592 693 aa17.39■□□□□ 0.37
TPM1-219ENST00000559397 TCRBV5S1A1TA0A578 114 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 PRRG1O14668 218 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 DDX3YO15523 660 aaKnown RBP17.38■□□□□ 0.37
TPM1-219ENST00000559397 CALB1P05937 261 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 C8AP07357 584 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 RPL34P49207 117 aaKnown RBP17.38■□□□□ 0.37
TPM1-219ENST00000559397 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
TPM1-219ENST00000559397 SDHAF4Q5VUM1 108 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 PMF1Q6P1K2 205 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 LLGL2Q6P1M3 1020 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 RTL10Q7L3V2 364 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 PIGZQ86VD9 579 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 EFHBQ8N7U6 833 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 SLC7A14Q8TBB6 771 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms