RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SUSD6Q92537 303 aa15.6■□□□□ 0.09
SNRPA1-207ENST00000559309 PPP1R13BQ96KQ4 1090 aa15.6■□□□□ 0.09
SNRPA1-207ENST00000559309 CNGB3Q9NQW8 809 aa15.6■□□□□ 0.09
SNRPA1-207ENST00000559309 ZNHIT6Q9NWK9 470 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-207ENST00000559309 E5RJQ4 531 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 CCL16O15467 120 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 RTN2O75298 545 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 ERBB2P04626 1255 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 SRGAP2BP0DMP2 458 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 CCR2P41597 374 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 MRPS5P82675 430 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 CCZ1BP86790 482 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 CCZ1P86791 482 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 TSR1Q2NL82 804 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 TDRD12Q587J7 1177 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 NAA35Q5VZE5 725 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 OLFML1Q6UWY5 402 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 RAD9BQ6WBX8 426 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 GAREM2Q75VX8 874 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 BEND5Q7L4P6 421 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 ZDHHC17Q8IUH5 632 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 C12orf76Q8N812 135 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 LEMD2Q8NC56 503 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 STKLD1Q8NE28 680 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 GIPC2Q8TF65 315 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 CPA5Q8WXQ8 436 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 IRGQQ8WZA9 623 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 MCRS1Q96EZ8 462 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 FBXO44Q9H4M3 255 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 CLDND1Q9NY35 253 aa15.59■□□□□ 0.09
SNRPA1-207ENST00000559309 SOBPA7XYQ1 873 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 EIF3CLB5ME19 914 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 XYLBO75191 536 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 FBXO21O94952 628 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ZBED1O96006 694 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 PTPN2P17706 415 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 YWHAQP27348 245 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 PGFP49763 221 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 RGS7P49802 495 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 TKTL1P51854 596 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ADIGQ0VDE8 80 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 CCDC173Q0VFZ6 552 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 VEPH1Q14D04 833 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 PPP1R15BQ5SWA1 713 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ALKBH5Q6P6C2 394 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 POTEHQ6S545 545 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ARCQ7LC44 396 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 SCD5Q86SK9 330 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 XYLT1Q86Y38 959 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 PPM1EQ8WY54 764 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 PIWIL1Q96J94 861 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ZNF512Q96ME7 567 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 NOX5Q96PH1 765 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 EIF3CQ99613 913 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ULBP1Q9BZM6 244 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 UBE2ZQ9H832 354 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 ASNSD1Q9NWL6 643 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 HCFC1R1Q9NWW0 138 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 EHD2Q9NZN4 543 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 CEP83Q9Y592 693 aa15.58■□□□□ 0.08
SNRPA1-207ENST00000559309 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 GOLGA6L6A8MZA4 724 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 OLFM2O95897 454 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 FYNP06241 537 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 PPP3CCP48454 512 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 GFPT1Q06210 699 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 ZNF268Q14587 947 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 TCEAL1Q15170 157 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 SLC5A9Q2M3M2 681 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 PLEKHA7Q6IQ23 1121 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 TMC5Q6UXY8 1006 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 SLC26A9Q7LBE3 791 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 VPS36Q86VN1 386 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 ERICH1Q86X53 443 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 HS6ST3Q8IZP7 471 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 CCDC112Q8NEF3 446 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 ADAMTS19Q8TE59 1207 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 CLEC4CQ8WTT0 213 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 C18orf8Q96DM3 657 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 CCDC42Q96M95 316 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 LRRC4Q9HBW1 653 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 WDR6Q9NNW5 1121 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 CLIC5Q9NZA1 410 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 UXTQ9UBK9 157 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 TMEM59LQ9UK28 342 aa15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 REXO2Q9Y3B8 237 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 EPN1Q9Y6I3 576 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-207ENST00000559309 ZNF840PA6NDX5 716 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 YJEFN3A6XGL0 299 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 E7ENQ6 273 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 NDUFA10O95299 355 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 FGF19O95750 216 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 FTLP02792 175 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 RHOP08100 348 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 GLI1P08151 1106 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 WEE1P30291 646 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 NSFP46459 744 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 PSEN1P49768 467 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms