RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 USP15Q9Y4E8 981 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 FSD2A1L4K1 749 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 PMS2P1A4D2B8 440 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 A6NCN8 305 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CAPN14A8MX76 684 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 B4E171 279 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 STX16-NPEPL1H3BU86 382 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 STX16O14662 325 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CD3EAPO15446 510 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 KLK10O43240 276 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ANP32CO43423 234 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TRIAP1O43715 76 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 B4GALT3O60512 393 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ZBED4O75132 1171 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 GFPT2O94808 682 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NTSR2O95665 410 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CER1O95813 267 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 GLDCP23378 1020 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RBL1P28749 1068 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ADORA2AP29274 412 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 EPHA3P29320 983 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SLC5A2P31639 672 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TSPAN7P41732 249 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NPTX2P47972 431 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NDUFV1P49821 464 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 GATMP50440 423 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SEC24CP53992 1094 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NR1H2P55055 460 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CASP6P55212 293 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RNASE9P60153 205 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 VAMP2P63027 116 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 MC2RQ01718 297 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 FPGSQ05932 587 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SF3A3Q12874 501 aaKnown RBP eCLIP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 PRKG2Q13237 762 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 BFSP2Q13515 415 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CCNIQ14094 377 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 EFR3AQ14156 821 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CSHL1Q14406 222 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 GPR68Q15743 365 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ZIK1Q3SY52 487 aaPredicted RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CD300EQ496F6 205 aaPredicted RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SLC45A4Q5BKX6 768 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RBM20Q5T481 1227 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 AGAP9Q5VTM2 703 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ANKRD40Q6AI12 368 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SFRP4Q6FHJ7 346 aaPredicted RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ABLIM2Q6H8Q1 611 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RINLQ6ZS11 566 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CLNKQ7Z7G1 428 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SGMS1Q86VZ5 419 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 HERC6Q8IVU3 1022 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TMEM151BQ8IW70 566 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 LGI4Q8N135 537 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SYNE4Q8N205 404 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TMTC2Q8N394 836 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ANKRD44Q8N8A2 993 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 LINC01356Q8N9X3 169 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 C1orf131Q8NDD1 294 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 OR56A1Q8NGH5 318 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 OR52N2Q8NGI0 321 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 MBD3L2Q8NHZ7 208 aaPredicted RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 OSCP1Q8WVF1 389 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 HERVK_113Q902F9 699 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ST8SIA4Q92187 359 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SNX19Q92543 992 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RSC1A1Q92681 617 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 MBD6Q96DN6 1003 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RNF31Q96EP0 1072 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RBM17Q96I25 401 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 FAM227BQ96M60 508 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 GNRHR2Q96P88 292 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TWNKQ96RR1 684 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NELL2Q99435 816 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NUDT16L1Q9BRJ7 211 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TTPALQ9BTX7 342 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 DDX23Q9BUQ8 820 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 TPSD1Q9BZJ3 242 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 PAIP1Q9H074 479 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 OSBPL5Q9H0X9 879 aaPredicted RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 VPS16Q9H269 839 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 PDCL3Q9H2J4 239 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CCDC134Q9H6E4 229 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ACAD9Q9H845 621 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 LIN7CQ9NUP9 197 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ETAA1Q9NY74 926 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 PLA2G3Q9NZ20 509 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ORC3Q9UBD5 711 aaPredicted RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NDRG4Q9ULP0 352 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NFU1Q9UMS0 254 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SMG5Q9UPR3 1016 aaKnown RBP2.59□□□□□ -1.99
GABPB1-209ENST00000559100 CNTN6Q9UQ52 1028 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 SH3BP1Q9Y3L3 701 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 NEU2Q9Y3R4 380 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 RPS6KL1Q9Y6S9 549 aa2.59□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF536O15090 1300 aa2.59□□□□□ -2
GABPB1-209ENST00000559100 A0A1B0GTW7 788 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 A0A1W2PPH5 198 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 K7ENM7 598 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 PSMD9O00233 223 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms