RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 RUFY2Q8WXA3 655 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 MAP4K1Q92918 833 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 RAX2Q96IS3 184 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 GPHA2Q96T91 129 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 KRT23Q9C075 422 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 UPF3AQ9H1J1 476 aaKnown RBP5.71□□□□□ -1.5
CASC4-207ENST00000559037 XPNPEP3Q9NQH7 507 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 HOMER2Q9NSB8 354 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 CYP39A1Q9NYL5 469 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 CHMP5Q9NZZ3 219 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 PRSS50Q9UI38 385 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 PNMA2Q9UL42 364 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 CCPG1Q9ULG6 757 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 CNPY2Q9Y2B0 182 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 WDR19Q8NEZ3 1342 aa5.71□□□□□ -1.5
CASC4-207ENST00000559037 CUL9Q8IWT3 2517 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 LOC102724159A0A0B4J2E5 919 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 MYADML2A6NDP7 307 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 ASB14A6NK59 587 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 EYA4O95677 639 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 CYP21A2P08686 494 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 GOLGA8HP0CJ92 632 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 HNRNPLP14866 589 aaKnown RBP eCLIP5.7□□□□□ -1.5
CASC4-207ENST00000559037 CST5P28325 142 aaPredicted RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 ACLYP53396 1101 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 NPEPPSP55786 919 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 ANAPC15P60006 121 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 IKQ13123 557 aaPredicted RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 BAATQ14032 418 aaPredicted RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 PWP2Q15269 919 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 CCDC96Q2M329 555 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 LRIT3Q3SXY7 679 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 TMEM63BQ5T3F8 832 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 GPATCH4Q5T3I0 446 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 FAM111BQ6SJ93 734 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 CYB5R4Q7L1T6 521 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 IQCA1Q86XH1 822 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 SPATS2Q86XZ4 545 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 TBC1D5Q92609 795 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 RPL10LQ96L21 214 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 MAF1Q9H063 256 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 CPVLQ9H3G5 476 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 AGO3Q9H9G7 860 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 JMJD4Q9H9V9 463 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 PDGFCQ9NRA1 345 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.7□□□□□ -1.5
CASC4-207ENST00000559037 MCM8Q9UJA3 840 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 TMPRSS11EQ9UL52 423 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 USP18Q9UMW8 372 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 GIT1Q9Y2X7 761 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 Q9Y3F1 56 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 DDX49Q9Y6V7 483 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 LAMA2P24043 3122 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 ELP1O95163 1332 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 FRMPD2Q68DX3 1309 aaPredicted RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 RAD50Q92878 1312 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 SYNRGQ9UMZ2 1314 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 PTPRSQ13332 1948 aa5.7□□□□□ -1.5
CASC4-207ENST00000559037 PRRC2BQ5JSZ5 2229 aaKnown RBP5.7□□□□□ -1.5
CASC4-207ENST00000559037 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 KIAA0355O15063 1070 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 ALDH1A2O94788 518 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 IPO13O94829 963 aaKnown RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 LY86O95711 162 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 MTHFD2P13995 350 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 TNFRSF1AP19438 455 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 ENPP1P22413 925 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 ITGB8P26012 769 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 RPS6P62753 249 aaKnown RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 TNFAIP2Q03169 654 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 PUM1Q14671 1186 aaKnown RBP eCLIP5.69□□□□□ -1.5
CASC4-207ENST00000559037 STAT4Q14765 748 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 TRIM60Q495X7 471 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 RNF187Q5TA31 235 aaPredicted RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 CCDC62Q6P9F0 684 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 RNF207Q6ZRF8 634 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 STOX1Q6ZVD7 989 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 GAREM2Q75VX8 874 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 TAS1R1Q7RTX1 841 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 ANKRD33Q7Z3H0 272 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 STRA8Q7Z7C7 330 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 SLC41A1Q8IVJ1 513 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 PALM2Q8IXS6 379 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 ADGRF4Q8IZF3 695 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 TDHQ8IZJ6 230 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 UBR7Q8N806 425 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 PCSK9Q8NBP7 692 aaKnown RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 MIEF2Q96C03 454 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 MTMR8Q96EF0 704 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 UBA5Q9GZZ9 404 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 SPC25Q9HBM1 224 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 TLR9Q9NR96 1032 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 ADD3Q9UEY8 706 aaKnown RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 ZHX1Q9UKY1 873 aaPredicted RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 ISY1Q9ULR0 285 aaKnown RBP5.69□□□□□ -1.5
CASC4-207ENST00000559037 ATP11BQ9Y2G3 1177 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 CDY2AQ9Y6F7 541 aa5.69□□□□□ -1.5
CASC4-207ENST00000559037 TNKSO95271 1327 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms