RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PDGFRLQ15198 375 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 CNGA2Q16280 664 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 MAN2A1Q16706 1144 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 EXOC3L4Q17RC7 722 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 HECTD3Q5T447 861 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 PPP1R26Q5T8A7 1209 aaPredicted RBP8.96□□□□□ -0.98
TPM1-213ENST00000558400 CLEC20AQ6ZU45 233 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 DDX42Q86XP3 938 aaKnown RBP eCLIP8.96□□□□□ -0.98
TPM1-213ENST00000558400 IRF2BP1Q8IU81 584 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 ZNF276Q8N554 614 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 ARL14EPQ8N8R7 260 aaPredicted RBP8.96□□□□□ -0.98
TPM1-213ENST00000558400 TWNKQ96RR1 684 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 CYP2S1Q96SQ9 504 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 NAT10Q9H0A0 1025 aaKnown RBP8.96□□□□□ -0.98
TPM1-213ENST00000558400 TBC1D17Q9HA65 648 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 TRPC7Q9HCX4 862 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 GKN1Q9NS71 199 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 TMEM30AQ9NV96 361 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 GCNT4Q9P109 453 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 HMGXB4Q9UGU5 601 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 ARHGAP26Q9UNA1 814 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 SCML2Q9UQR0 700 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 PCDHB4Q9Y5E5 795 aa8.96□□□□□ -0.98
TPM1-213ENST00000558400 MED19A0JLT2 244 aaPredicted RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 FAM170BA6NMN3 283 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TADA3O75528 432 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 BEST1O76090 585 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 PDGFBP01127 241 aaPredicted RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 ZDHHC11BP0C7U3 371 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 CD19P15391 556 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 ACO1P21399 889 aaKnown RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 EEF1GP26641 437 aaKnown RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 KPNA1P52294 538 aaPredicted RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 KIF11P52732 1056 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 CACNA2D1P54289 1103 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 IFRD2Q12894 506 aaPredicted RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 ORC1Q13415 861 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 ITPRIPL2Q3MIP1 535 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 VWA3BQ502W6 1294 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TMEM270Q6UE05 265 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 MAMSTRQ6ZN01 415 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TPRG1Q6ZUI0 275 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TADA2BQ86TJ2 420 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 RALGPS2Q86X27 583 aaPredicted RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 GPIHBP1Q8IV16 184 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 ARHGAP18Q8N392 663 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 ZMIZ2Q8NF64 920 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 ANKRD20A12PQ8NF67 263 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 SCAMP5Q8TAC9 235 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 LRRC3BQ96PB8 259 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 CDK5RAP1Q96SZ6 601 aaKnown RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 ARID3AQ99856 593 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 FAM83CQ9BQN1 747 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TUBGCP2Q9BSJ2 902 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 INTS2Q9H0H0 1204 aaKnown RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 NDST4Q9H3R1 872 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 UBE2TQ9NPD8 197 aaPredicted RBP8.95□□□□□ -0.98
TPM1-213ENST00000558400 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 HEBP1Q9NRV9 189 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TBC1D14Q9P2M4 693 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 USP3Q9Y6I4 520 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 TSC2P49815 1807 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 NCOR2Q9Y618 2525 aa8.95□□□□□ -0.98
TPM1-213ENST00000558400 C2orf78A6NCI8 922 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 HHLA1C9JL84 531 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 H0Y858 1186 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 ARNTLO00327 626 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 XPO1O14980 1071 aaKnown RBP8.94□□□□□ -0.98
TPM1-213ENST00000558400 MED7O43513 233 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 PRAMEF12O95522 483 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 OLFM2O95897 454 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 OAS1P00973 400 aaKnown RBP8.94□□□□□ -0.98
TPM1-213ENST00000558400 SETSIPP0DME0 302 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 RALAP11233 206 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 ATP5C1P36542 298 aaKnown RBP8.94□□□□□ -0.98
TPM1-213ENST00000558400 NBL1P41271 181 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 RPS9P46781 194 aaKnown RBP8.94□□□□□ -0.98
TPM1-213ENST00000558400 BCAT1P54687 386 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 GOLGA8FQ08AF8 430 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 GOLGA8DPQ0D2H9 430 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 BST2Q10589 180 aaKnown RBP8.94□□□□□ -0.98
TPM1-213ENST00000558400 RUNX3Q13761 415 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 MTF1Q14872 753 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 STX1AQ16623 288 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 TCP11X2Q5H9J9 407 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 KLHDC10Q6PID8 442 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 TRIM65Q6PJ69 517 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 LCLAT1Q6UWP7 414 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 RRAGAQ7L523 313 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 CCDC186Q7Z3E2 898 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 UBR7Q8N806 425 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 TMEM105Q8N8V8 129 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 PJA1Q8NG27 643 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 SH3RF2Q8TEC5 729 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 OSCP1Q8WVF1 389 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 FAM3CQ92520 227 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 CLDN23Q96B33 292 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 OTUB2Q96DC9 234 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 RSPRY1Q96DX4 576 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 SLC22A12Q96S37 553 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms