RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 SRSF5Q13243 272 aaKnown RBP17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 RIF1Q5UIP0 2472 aaKnown RBP17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 GPRIN1Q7Z2K8 1008 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 FILIP1Q7Z7B0 1213 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 KIAA2013Q8IYS2 634 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 CD101Q93033 1021 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 TIGD1Q96MW7 591 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 CYP3A43Q9HB55 503 aa17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 POLR3BQ9NW08 1133 aaPredicted RBP17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 CHORDC1Q9UHD1 332 aaPredicted RBP17.17■□□□□ 0.34
AC027088.1-201ENST00000557966 HHLA1C9JL84 531 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 NFATC1O95644 943 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CYP17A1P05093 508 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 DRD1P21728 446 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 GTF2H1P32780 548 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 OPRD1P41143 372 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 AMPD2Q01433 879 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CBWD6Q4V339 395 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CBWD3Q5JTY5 395 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CBWD5Q5RIA9 395 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 SNX30Q5VWJ9 437 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 HEATR6Q6AI08 1181 aaKnown RBP17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 ANKRD40Q6AI12 368 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CLEC20AQ6ZU45 233 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 HNRNPABQ99729 332 aaKnown RBP17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 NT5C1AQ9BXI3 368 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CCSER2Q9H7U1 834 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 CFAP97Q9P2B7 532 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 NCDNQ9UBB6 729 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 OTOGLQ3ZCN5 2332 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 GPR179Q6PRD1 2367 aa17.16■□□□□ 0.34
AC027088.1-201ENST00000557966 KIAA1549LQ6ZVL6 1849 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 ANTXRLA6NF34 631 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 SLC16A3O15427 465 aaKnown RBP17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 HRO43593 1189 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 SMC2O95347 1197 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 FAM200BP0CF97 657 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 CD44P16070 742 aaKnown RBP17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 LPAL2Q16609 132 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 ISM2Q6H9L7 571 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 LONP2Q86WA8 852 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 WBP2Q969T9 261 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 JAKMIP2Q96AA8 810 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 TSG101Q99816 390 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 ARID3AQ99856 593 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 COMMD8Q9NX08 183 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 RAB20Q9NX57 234 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 MAN1B1Q9UKM7 699 aa17.15■□□□□ 0.34
AC027088.1-201ENST00000557966 GADD45BO75293 160 aaPredicted RBP17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 PXNP49023 591 aaPredicted RBP17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 TUBP50607 506 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 ZNF394Q53GI3 561 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 HECTD3Q5T447 861 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 KIAA1958Q8N8K9 716 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 CCDC150Q8NCX0 1101 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 OSER1Q9NX31 292 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 PTPRZ1P23471 2315 aaPredicted RBP17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 MYO16Q9Y6X6 1858 aa17.14■□□□□ 0.33
AC027088.1-201ENST00000557966 DNAH14Q0VDD8 3507 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 CYP26A1O43174 497 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 HOXA6P31267 233 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 FKBP3Q00688 224 aaKnown RBP17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 MESP2Q0VG99 397 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 NR1H3Q13133 447 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 DHCR24Q15392 516 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 PPP1R26Q5T8A7 1209 aaPredicted RBP17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 TCERG1LQ5VWI1 586 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 PRR23BQ6ZRT6 265 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 WDR5BQ86VZ2 330 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 C12orf40Q86WS4 652 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 DDX42Q86XP3 938 aaKnown RBP eCLIP17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 ADGRG2Q8IZP9 1017 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 RPLP0P6Q8NHW5 317 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 TATDN2Q93075 761 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 CISHQ9NSE2 258 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 DCHS1Q96JQ0 3298 aa17.13■□□□□ 0.33
AC027088.1-201ENST00000557966 STX10O60499 249 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 TLR5O60602 858 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 TBX18O95935 607 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 BMP6P22004 513 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 TGM1P22735 817 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 ID4P47928 161 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 SIM2Q14190 667 aaPredicted RBP17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 FBXO43Q4G163 708 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 RHBDF2Q6PJF5 856 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 SLC4A11Q8NBS3 891 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 EXOC4Q96A65 974 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 RMDN1Q96DB5 314 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 HHIPQ96QV1 700 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 NMUR1Q9HB89 426 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 PARD6AQ9NPB6 346 aa17.12■□□□□ 0.33
AC027088.1-201ENST00000557966 SCML2Q9UQR0 700 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms