RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SLC51AQ86UW1 340 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ZDHHC14Q8IZN3 488 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 TTC39CQ8N584 583 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 FSIP1Q8NA03 581 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 TMIEQ8NEW7 156 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 METTL6Q8TCB7 284 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 NOC3LQ8WTT2 800 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 SLC22A17Q8WUG5 538 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 JAKMIP2Q96AA8 810 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 KTI12Q96EK9 354 aaPredicted RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 CEP95Q96GE4 821 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 NUDT22Q9BRQ3 303 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 IMPG2Q9BZV3 1241 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 TTYH3Q9C0H2 523 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 SLC25A18Q9H1K4 315 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 OR10A4Q9H209 315 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 KCNH6Q9H252 994 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 MUC13Q9H3R2 512 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 GRPEL1Q9HAV7 217 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 CCDC177Q9NQR7 707 aaPredicted RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 ATP8A2Q9NTI2 1148 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 FBXO34Q9NWN3 711 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PPP1R14DQ9NXH3 145 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 CEP72Q9P209 647 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 KLHL14Q9P2G3 628 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 DNAJB11Q9UBS4 358 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 ZNF112Q9UJU3 913 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 GDAQ9Y2T3 454 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 YBX2Q9Y2T7 364 aaKnown RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 PSAT1Q9Y617 370 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 PIAS3Q9Y6X2 628 aa4.17□□□□□ -1.74
TDP1-217ENST00000557782 SOS1Q07889 1333 aaPredicted RBP4.17□□□□□ -1.74
TDP1-217ENST00000557782 RUSC2Q8N2Y8 1516 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 ZMYM3Q14202 1370 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TRIM64A6NGJ6 449 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TRIM64BA6NI03 449 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 PRR19A6NJB7 356 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 WNT10BO00744 389 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TNPO2O14787 897 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 SRGAP2O75044 1071 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TULP3O75386 442 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TAF5LO75529 589 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 BEST1O76090 585 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 POMCP01189 267 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 FDXRP22570 491 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 EPHA8P29322 1005 aaPredicted RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 HOXA10P31260 410 aaPredicted RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 ABCD1P33897 745 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 PSMB10P40306 273 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 GPD2P43304 727 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 MAGEA10P43363 369 aaPredicted RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 TNNT3P45378 269 aaPredicted RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 CLK1P49759 484 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 AFF3P51826 1226 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 CLRN1P58418 232 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 RAP2BP61225 183 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 PCOLCEQ15113 449 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 MSMPQ1L6U9 139 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TBRG1Q3YBR2 411 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 DUSP28Q4G0W2 176 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 GAGE13Q4V321 117 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 ZNF484Q5JVG2 852 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 ZNF569Q5MCW4 686 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 SLC10A5Q5PT55 438 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 NUGGCQ68CJ6 796 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TRIM68Q6AZZ1 485 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TRMT10BQ6PF06 316 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 SYNE3Q6ZMZ3 975 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 RASGRP2Q7LDG7 609 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 PPP1R32Q7Z5V6 425 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 KCTD20Q7Z5Y7 419 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 TRABD2AQ86V40 505 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 CCDC105Q8IYK2 499 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 SPARTQ8N0X7 666 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 C17orf53Q8N3J3 647 aaPredicted RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 GALNT4Q8N4A0 578 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 FITM2Q8N6M3 262 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 ARL10Q8N8L6 244 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 FAM71DQ8N9W8 422 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 MSANTD4Q8NCY6 345 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 ZCCHC10Q8TBK6 192 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 BPIFB1Q8TDL5 484 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 RSPH1Q8WYR4 309 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 INTS4Q96HW7 963 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 RBM17Q96I25 401 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 JAKMIP1Q96N16 626 aaKnown RBP4.16□□□□□ -1.74
TDP1-217ENST00000557782 SLC46A1Q96NT5 459 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 EDEM3Q9BZQ6 932 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 SLC6A17Q9H1V8 727 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 SERHL2Q9H4I8 314 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 GSTO2Q9H4Y5 243 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 RABEP2Q9H5N1 569 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 BRF2Q9HAW0 419 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 PRDM7Q9NQW5 492 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 ABCF3Q9NUQ8 709 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 C19orf73Q9NVV2 129 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 HCFC1R1Q9NWW0 138 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 NCDNQ9UBB6 729 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 MORF4L1Q9UBU8 362 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 USP22Q9UPT9 525 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms