RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 COL4A2P08572 1712 aa13.21□□□□□ -0.3
SLIRP-211ENST00000557623 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 BEST1O76090 585 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 LETM1O95202 739 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-211ENST00000557623 CKMP06732 381 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 CD19P15391 556 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 HDCP19113 662 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 MFAP3P55082 362 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 MYL5Q02045 173 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 PRKCQQ04759 706 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 FCHO2Q0JRZ9 810 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 STILQ15468 1287 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 ARHGAP29Q52LW3 1261 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 SLC44A4Q53GD3 710 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 TCP11X2Q5H9J9 407 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 PHLDB3Q6NSJ2 640 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
SLIRP-211ENST00000557623 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 ANKRD52Q8NB46 1076 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 UBE2TQ9NPD8 197 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-211ENST00000557623 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
SLIRP-211ENST00000557623 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
SLIRP-211ENST00000557623 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 ABL1P00519 1130 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 CLCN5P51795 746 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 BCAT1P54687 386 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 STARD6P59095 220 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 TYRO3Q06418 890 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 MLF2Q15773 248 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 SNX30Q5VWJ9 437 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 CSGALNACT1Q8TDX6 532 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 KAT5Q92993 513 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 TLR8Q9NR97 1041 aaKnown RBP13.19□□□□□ -0.3
SLIRP-211ENST00000557623 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 HCN4Q9Y3Q4 1203 aa13.19□□□□□ -0.3
SLIRP-211ENST00000557623 HHLA1C9JL84 531 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
SLIRP-211ENST00000557623 PDGFBP01127 241 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-211ENST00000557623 GLULP15104 373 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 TCF3P15923 654 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 SLC9A1P19634 815 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 PON1P27169 355 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 TUBP50607 506 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-211ENST00000557623 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
SLIRP-211ENST00000557623 CNGA2Q16280 664 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 GOLGA7BQ2TAP0 167 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 HECTD3Q5T447 861 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 CDKAL1Q5VV42 579 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 MSANTD3Q96H12 275 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 SMG9Q9H0W8 520 aaKnown RBP13.18□□□□□ -0.3
SLIRP-211ENST00000557623 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 TBC1D17Q9HA65 648 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-211ENST00000557623 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 ARHGAP26Q9UNA1 814 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 CNTN6Q9UQ52 1028 aa13.18□□□□□ -0.3
SLIRP-211ENST00000557623 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-211ENST00000557623 O00370 1275 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 MAN2B1O00754 1011 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
SLIRP-211ENST00000557623 OLFM2O95897 454 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
SLIRP-211ENST00000557623 ZDHHC11BP0C7U3 371 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 KRT5P13647 590 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 COL9A1P20849 921 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 AVPR2P30518 371 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 KIF11P52732 1056 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 ZNF132P52740 706 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 SLC7A9P82251 487 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-211ENST00000557623 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
SLIRP-211ENST00000557623 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms