RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 GCNT1Q02742 428 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 RUNX3Q13761 415 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 ARHGAP17Q68EM7 881 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 CLEC20AQ6ZU45 233 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 ANKRD52Q8NB46 1076 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 SLC4A11Q8NBS3 891 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 ANKRD20A12PQ8NF67 263 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 WHAMMQ8TF30 809 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 OSCP1Q8WVF1 389 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 RSPRY1Q96DX4 576 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 ZFYVE19Q96K21 471 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 CYP2S1Q96SQ9 504 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 UBXN6Q9BZV1 441 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 INTS2Q9H0H0 1204 aaKnown RBP14.58□□□□□ -0.08
VPS33B-206ENST00000557358 ANO10Q9NW15 660 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 SPATA6Q9NWH7 488 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-206ENST00000557358 GCNT4Q9P109 453 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 CHORDC1Q9UHD1 332 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-206ENST00000557358 SCML2Q9UQR0 700 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 CCL26Q9Y258 94 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 SH3BP1Q9Y3L3 701 aa14.58□□□□□ -0.08
VPS33B-206ENST00000557358 SPECC1L-ADORA2AF8WAN1 911 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 LAMTOR5O43504 91 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 OAS1P00973 400 aaKnown RBP14.57□□□□□ -0.08
VPS33B-206ENST00000557358 KRT5P13647 590 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 CD72P21854 359 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 CTHP32929 405 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 RPS9P46781 194 aaKnown RBP14.57□□□□□ -0.08
VPS33B-206ENST00000557358 GRSF1Q12849 480 aaKnown RBP eCLIP14.57□□□□□ -0.08
VPS33B-206ENST00000557358 USP4Q13107 963 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 ZNF77Q15935 545 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 MAN2A1Q16706 1144 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 EXOC3L4Q17RC7 722 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 DPCR1Q3MIW9 517 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 DGKKQ5KSL6 1271 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 SNX30Q5VWJ9 437 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 PRSS33Q8NF86 280 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 CCDC26Q8TAB7 109 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 EBF3Q9H4W6 596 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 LRRC4Q9HBW1 653 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 TMEM30AQ9NV96 361 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 GTSE1Q9NYZ3 720 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 IL37Q9NZH6 218 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 GMIPQ9P107 970 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 TBC1D14Q9P2M4 693 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 CPQQ9Y646 472 aa14.57□□□□□ -0.08
VPS33B-206ENST00000557358 FAM92AA1XBS5 289 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 GTPBP10A4D1E9 387 aaKnown RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 LEFTY2O00292 366 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 ARNTLO00327 626 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 MED7O43513 233 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 TLR5O60602 858 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 BEST1O76090 585 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 TARSP26639 723 aaKnown RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 ATP5C1P36542 298 aaKnown RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 BST2Q10589 180 aaKnown RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 ANGPT1Q15389 498 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 GOLGA7BQ2TAP0 167 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 ZC3H14Q6PJT7 736 aaKnown RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 RRAGAQ7L523 313 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 C1orf210Q8IVY1 113 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 ZMIZ2Q8NF64 920 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 TTC8Q8TAM2 541 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 LRRC3BQ96PB8 259 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 SLC22A12Q96S37 553 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 FAM83CQ9BQN1 747 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 UBE2TQ9NPD8 197 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 SMPD4Q9NXE4 827 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 NAGPAQ9UK23 515 aa14.56□□□□□ -0.08
VPS33B-206ENST00000557358 LSM7Q9UK45 103 aaKnown RBP14.56□□□□□ -0.08
VPS33B-206ENST00000557358 MYO16Q9Y6X6 1858 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 HELZP42694 1942 aaKnown RBP14.55□□□□□ -0.08
VPS33B-206ENST00000557358 H0Y858 1186 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 XPO1O14980 1071 aaKnown RBP14.55□□□□□ -0.08
VPS33B-206ENST00000557358 KIF11P52732 1056 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 NHLH1Q02575 133 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 TNK2Q07912 1038 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 CAVIN1Q6NZI2 390 aaKnown RBP14.55□□□□□ -0.08
VPS33B-206ENST00000557358 RSRC2Q7L4I2 434 aaKnown RBP14.55□□□□□ -0.08
VPS33B-206ENST00000557358 CCDC186Q7Z3E2 898 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 SIX6OS1Q8N1H7 587 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 SYNPOQ8N3V7 929 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 RBBP8NLQ8NC74 664 aaPredicted RBP14.55□□□□□ -0.08
VPS33B-206ENST00000557358 CLDN23Q96B33 292 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 OTUB2Q96DC9 234 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 CRACR2AQ9BSW2 395 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 NAT10Q9H0A0 1025 aaKnown RBP14.55□□□□□ -0.08
VPS33B-206ENST00000557358 LMAN1LQ9HAT1 526 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 CFAP97Q9P2B7 532 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 TSPAN16Q9UKR8 245 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 CACNA1HO95180 2353 aa14.55□□□□□ -0.08
VPS33B-206ENST00000557358 E2F8A0AVK6 867 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 COCHO43405 550 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 OLFM2O95897 454 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 ADH1CP00326 375 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 ZDHHC11BP0C7U3 371 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 EEF1GP26641 437 aaKnown RBP14.54□□□□□ -0.08
VPS33B-206ENST00000557358 TCF15Q12870 199 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms