RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RUNDC1Q96C34 613 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 CTHRC1Q96CG8 243 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 HMCESQ96FZ2 354 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 CCDC17Q96LX7 622 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 PPP1R9BQ96SB3 815 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 TRIM5Q9C035 493 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 TRNAU1APQ9NX07 287 aaKnown RBP5.17□□□□□ -1.58
VRK1-207ENST00000557352 STK32BQ9NY57 414 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 DNMT3BQ9UBC3 853 aaKnown RBP5.17□□□□□ -1.58
VRK1-207ENST00000557352 USP22Q9UPT9 525 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 PAXBP1Q9Y5B6 917 aa5.17□□□□□ -1.58
VRK1-207ENST00000557352 CAPN8A6NHC0 703 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 M0R3H8 397 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 DSCR3O14972 297 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 MARCH6O60337 910 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 SRGAP2O75044 1071 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 NTN1O95631 604 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 EPHA3P29320 983 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 UQCRC1P31930 480 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 PLCD1P51178 756 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 COPB1P53618 953 aaKnown RBP5.16□□□□□ -1.58
VRK1-207ENST00000557352 SUMO3P55854 103 aaPredicted RBP5.16□□□□□ -1.58
VRK1-207ENST00000557352 INSCQ1MX18 579 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 KCTD20Q7Z5Y7 419 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 KIAA0319LQ8IZA0 1049 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 NANOGP1Q8N7R0 232 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 SUCLG2Q96I99 432 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 VN1R3Q9BXE9 311 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 TMEM60Q9H2L4 133 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 CPNE7Q9UBL6 633 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 AFG3L2Q9Y4W6 797 aa5.16□□□□□ -1.58
VRK1-207ENST00000557352 TRIM43BA6NCK2 446 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 IKBKBO14920 756 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 SPRY2O43597 315 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 RASAL1O95294 804 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 APEHP13798 732 aaKnown RBP5.15□□□□□ -1.59
VRK1-207ENST00000557352 PHKG2P15735 406 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 DIO1P49895 249 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 TIRAPP58753 221 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 CNN3Q15417 329 aaKnown RBP5.15□□□□□ -1.59
VRK1-207ENST00000557352 C4orf46Q504U0 113 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 AWAT1Q58HT5 328 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 CACHD1Q5VU97 1274 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 PIGOQ8TEQ8 1089 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 PNISRQ8TF01 805 aaKnown RBP5.15□□□□□ -1.59
VRK1-207ENST00000557352 TRIM43Q96BQ3 446 aaPredicted RBP5.15□□□□□ -1.59
VRK1-207ENST00000557352 COQ8BQ96D53 544 aa5.15□□□□□ -1.59
VRK1-207ENST00000557352 LOC102723971A0A1B0GUV8 181 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 MBD3L4A6NDZ8 208 aaPredicted RBP5.14□□□□□ -1.59
VRK1-207ENST00000557352 MBD3L3A6NE82 208 aaPredicted RBP5.14□□□□□ -1.59
VRK1-207ENST00000557352 H7C4K7 107 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 PYCARD-AS1I3L0S3 204 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 CD3EAPO15446 510 aaKnown RBP5.14□□□□□ -1.59
VRK1-207ENST00000557352 CCP110O43303 1012 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 RGS10O43665 173 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 FGBP02675 491 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 TIAL1Q01085 375 aaKnown RBP eCLIP5.14□□□□□ -1.59
VRK1-207ENST00000557352 LRRC41Q15345 812 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 ZNF260Q3ZCT1 412 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 APOA5Q6Q788 366 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 SHC4Q6S5L8 630 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 LINC01465Q8N7H1 131 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 C16orf52Q8NHV5 167 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.14□□□□□ -1.59
VRK1-207ENST00000557352 ZBTB45Q96K62 511 aaPredicted RBP5.14□□□□□ -1.59
VRK1-207ENST00000557352 SNX15Q9NRS6 342 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 SACM1LQ9NTJ5 587 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 L1RE1Q9UN81 338 aa5.14□□□□□ -1.59
VRK1-207ENST00000557352 THRAP3Q9Y2W1 955 aaKnown RBP5.14□□□□□ -1.59
VRK1-207ENST00000557352 CFAP69A5D8W1 941 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 ISM1B1AKI9 464 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 FAM227AF5H4B4 570 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 TRIM38O00635 465 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 SOCS2O14508 198 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 ADAM10O14672 748 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 PRPF3O43395 683 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 RRP9O43818 475 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 RASSF9O75901 435 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 HGFP14210 728 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 BRAFP15056 766 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 CREB1P16220 341 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 KLRC1P26715 233 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 PTDSS1P48651 473 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 MTHFSP49914 203 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 GHRHRQ02643 423 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 FHL1Q13642 323 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 LARS2Q15031 903 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 NPY5RQ15761 445 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 CXorf57Q6NSI4 855 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 TMEM65Q6PI78 240 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 MRPL10Q7Z7H8 261 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 RAVER1Q8IY67 606 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 NRACQ8N912 160 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 OSR1Q8TAX0 266 aaPredicted RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 NMD3Q96D46 503 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 WDYHV1Q96HA8 205 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 WACQ9BTA9 647 aa5.13□□□□□ -1.59
VRK1-207ENST00000557352 MGAT4CQ9UBM8 478 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms