RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CCDC181Q5TID7 509 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 LIN9Q5TKA1 542 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 RNF111Q6ZNA4 994 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 KRBA2Q6ZNG9 492 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 RTL10Q7L3V2 364 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
ATXN3-247ENST00000557311 SPPL2CQ8IUH8 684 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 KSR1Q8IVT5 923 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 DAGLBQ8NCG7 672 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 CXorf38Q8TB03 319 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 ITFG1Q8TB96 612 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 DNASE1L2Q92874 299 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 DIRC2Q96SL1 478 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 GAD1Q99259 594 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 RIT2Q99578 217 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 SLC38A3Q99624 504 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 HDAC8Q9BY41 377 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 IL25Q9H293 177 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 LMAN1LQ9HAT1 526 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 AGPAT5Q9NUQ2 364 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 BARHL2Q9NY43 387 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 FAM53CQ9NYF3 392 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 GDE1Q9NZC3 331 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 FRMD4BQ9Y2L6 1034 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 SPTBN2O15020 2390 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 ARL5CA6NH57 179 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 CCL16O15467 120 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 GAS7O60861 476 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 STBD1O95210 358 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 IPO7O95373 1038 aaKnown RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 TPM3P06753 285 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 RPL17P18621 184 aaKnown RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 SOX9P48436 509 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 PMS1P54277 932 aaKnown RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 NTHL1P78549 312 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 TEKQ02763 1124 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 FOXD4Q12950 439 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 PCBP1Q15365 356 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 MTERF2Q49AM1 385 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 LRCH2Q5VUJ6 765 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 FUT10Q6P4F1 479 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 LONP2Q86WA8 852 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 CREBRFQ8IUR6 639 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 NAT16Q8N8M0 369 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 RDM1Q8NG50 284 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 BRF1Q92994 677 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 ELSPBP1Q96BH3 223 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 B3GALT6Q96L58 329 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 NLRP4Q96MN2 994 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 TEKT3Q9BXF9 490 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 C6orf50Q9HD87 102 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 HEBP1Q9NRV9 189 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 MIOSQ9NXC5 875 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 DNMT3BQ9UBC3 853 aaKnown RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 ADAM28Q9UKQ2 775 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
ATXN3-247ENST00000557311 MRPS23Q9Y3D9 190 aaKnown RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 FNDC1Q4ZHG4 1894 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-247ENST00000557311 DMXL1Q9Y485 3027 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 KIAA1671Q9BY89 1806 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 A0A1W2PQ27 194 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 A0A1W2PQ64 194 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 A0A1W2PQC6 194 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 A0A1W2PQD8 194 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 FITM1A5D6W6 292 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SHISA7A6NL88 538 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 F8W810 466 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PPP1R12AO14974 1030 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 MSH4O15457 936 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 ASAP2O43150 1006 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CHMP2AO43633 222 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 KCNK5O95279 499 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 ZGLP1P0C6A0 271 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF806P0C7X5 589 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SRGAP2CP0DJJ0 459 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CHMLP26374 656 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 GNA11P29992 359 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 AXLP30530 894 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 FNTBP49356 437 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SCNN1GP51170 649 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 MLLT6P55198 1093 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SLC7A5Q01650 507 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 RAB33AQ14088 237 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 UGCGQ16739 394 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 AASDHQ4L235 1098 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PABPC1LQ4VXU2 614 aaKnown RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 STPG1Q5TH74 334 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms