RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MAB21L3Q8N8X9 362 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 RASSF8Q8NHQ8 419 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 POMGNT1Q8WZA1 660 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ATP2A3Q93084 1043 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
VRK1-206ENST00000557222 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 P2RY13Q9BPV8 354 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ZHX3Q9H4I2 956 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 EBF3Q9H4W6 596 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ECT2Q9H8V3 914 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 GDAP2Q9NXN4 497 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ABI2Q9NYB9 513 aaPredicted RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 GDF2Q9UK05 429 aaPredicted RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 ANGPTL2Q9UKU9 493 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 HCN2Q9UL51 889 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 CCL26Q9Y258 94 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 TSC2P49815 1807 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 ZNF638Q14966 1978 aaKnown RBP9.3□□□□□ -0.92
VRK1-206ENST00000557222 ANK1P16157 1881 aa9.3□□□□□ -0.92
VRK1-206ENST00000557222 KIAA0391O15091 583 aaKnown RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 KRT37O76014 449 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 DKK1O94907 266 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 CCDC192P0DO97 292 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 PCSK1P29120 753 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 PMLP29590 882 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 GJA4P35212 333 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 MAGEA11P43364 429 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 DHX8Q14562 1220 aaKnown RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 MTF1Q14872 753 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 ELF2Q15723 593 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 PLK5Q496M5 336 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 ZC2HC1CQ53FD0 456 aaPredicted RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 STPG1Q5TH74 334 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 LARP1BQ659C4 914 aaKnown RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 TXNDC8Q6A555 127 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 PKN3Q6P5Z2 889 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 KBTBD6Q86V97 674 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 EFCAB13Q8IY85 973 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 PDCL2Q8N4E4 241 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 TOP6BLQ8N6T0 577 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 FSIP1Q8NA03 581 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 OSCP1Q8WVF1 389 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 CHFRQ96EP1 664 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 ACCSQ96QU6 501 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 PKMYT1Q99640 499 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 LSM14BQ9BX40 385 aaKnown RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 SMG9Q9H0W8 520 aaKnown RBP9.29□□□□□ -0.92
VRK1-206ENST00000557222 OLFML3Q9NRN5 406 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 TMLHEQ9NVH6 421 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 CCDC39Q9UFE4 941 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 ITGA11Q9UKX5 1188 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 SMC3Q9UQE7 1217 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 CACNA1GO43497 2377 aa9.29□□□□□ -0.92
VRK1-206ENST00000557222 ATG2BQ96BY7 2078 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 FRYQ5TBA9 3013 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 TRAV19A0A0A6YYK7 116 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 OTOL1A6NHN0 477 aaPredicted RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 GABRDO14764 452 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 APBB3O95704 486 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 EGFP01133 1207 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 FAM163BP0C2L3 166 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 PPP3CCP48454 512 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 RBP5P82980 135 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 TNP2Q05952 138 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 SF3A2Q15428 464 aaKnown RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 SF3A1Q15459 793 aaKnown RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 SURF1Q15526 300 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 MAPRE1Q15691 268 aaKnown RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 ZNF77Q15935 545 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 C8orf34Q49A92 452 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 N4BP2L1Q5TBK1 243 aaPredicted RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 TRIM68Q6AZZ1 485 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 FAM171BQ6P995 826 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 VSTM1Q6UX27 236 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 C4orf50Q6ZRC1 276 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 SV2BQ7L1I2 683 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 LIMS2Q7Z4I7 341 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 GOLGA6L1Q8N7Z2 621 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 C1orf127Q8N9H9 656 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 CXorf38Q8TB03 319 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 CD101Q93033 1021 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 DNAJC19Q96DA6 116 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 SPATA17Q96L03 361 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 PI4K2AQ9BTU6 479 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 DUSP15Q9H1R2 295 aaPredicted RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 TSPAN10Q9H1Z9 355 aaPredicted RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 MRPL44Q9H9J2 332 aaKnown RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 DUS2Q9NX74 493 aaKnown RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 DDX43Q9NXZ2 648 aaKnown RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 EHD2Q9NZN4 543 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 L1RE1Q9UN81 338 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 AGAP1Q9UPQ3 857 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms