RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 IFT122Q9HBG6 1241 aa15.99■□□□□ 0.15
TMEM55B-207ENST00000557041 PYGBP11216 843 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 AMPD1P23109 780 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 TMPRSS15P98073 1019 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 PCGF5Q86SE9 256 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 CYTH2Q99418 400 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 FERMT1Q9BQL6 677 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 AP5M1Q9H0R1 490 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 TRIM49D1C9J1S8 452 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 CPA2P48052 419 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 DPYSL3Q14195 570 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 SLC1A5Q15758 541 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 MTHFD1LQ6UB35 978 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 DENND5BQ6ZUT9 1274 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 APBB1IPQ7Z5R6 666 aaPredicted RBP15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 FUKQ8N0W3 1084 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 VPS52Q8N1B4 723 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 DEPDC1BQ8WUY9 529 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 CPT1BQ92523 772 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 SGSM3Q96HU1 749 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 RMDN2Q96LZ7 410 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 ZNF317Q96PQ6 595 aaPredicted RBP15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 PCMTD2Q9NV79 361 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 IL1RAPL1Q9NZN1 696 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 G3BP2Q9UN86 482 aaKnown RBP15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 CELF2O95319 508 aaKnown RBP15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 SLC26A2P50443 739 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 CA9Q16790 459 aa15.98■□□□□ 0.15
TMEM55B-207ENST00000557041 ATP8B3O60423 1300 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 USP12O75317 370 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 CILPO75339 1184 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 TMEM63AO94886 807 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 MCF2P10911 925 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 FAAP100Q0VG06 881 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 ZNF268Q14587 947 aaPredicted RBP15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 MCUR1Q96AQ8 359 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 BTBD19C9JJ37 291 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 I3L4J1 428 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 KCNK1O00180 336 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 CBX6O95503 412 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 TRUB2O95900 331 aaKnown RBP15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 LMO2P25791 158 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 FOXN2P32314 431 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 PPIL2Q13356 520 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 NOL9Q5SY16 702 aaKnown RBP15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 DSTYKQ6XUX3 929 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 PID1Q7Z2X4 250 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 APPL2Q8NEU8 664 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 CKAP2Q8WWK9 683 aa15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.97■□□□□ 0.15
TMEM55B-207ENST00000557041 FOCADQ5VW36 1801 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 IQANK1A0A1B0GTG1 560 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 C2orf71A6NGG8 1288 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 TFE3P19532 575 aaPredicted RBP15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 SULT1E1P49888 294 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ARHGAP1Q07960 439 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ACVR2BQ13705 512 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ARMC2Q8NEN0 867 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ZFP42Q96MM3 310 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 SNRNP25Q9BV90 132 aaKnown RBP15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 DOCK5Q9H7D0 1870 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 EVPLQ92817 2033 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 M0QZ92 97 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 F7P08709 466 aaPredicted RBP15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ABCG1P45844 678 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 SNX16P57768 344 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 GBE1Q04446 702 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 KLHL38Q2WGJ6 581 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ZNF618Q5T7W0 954 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 RWDD4Q6NW29 188 aaKnown RBP15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 PYROXD2Q8N2H3 581 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 ASB7Q9H672 318 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 SMYD2Q9NRG4 433 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 SLC17A7Q9P2U7 560 aa15.96■□□□□ 0.15
TMEM55B-207ENST00000557041 A8MUI8 341 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 ZBTB42B2RXF5 422 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 CHUKO15111 745 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 ATP9BO43861 1147 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 FSBPO95073 299 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 KLRC2P26717 231 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 GPD2P43304 727 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 WDR4P57081 412 aaKnown RBP15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 LGSNQ5TDP6 509 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 NOTUMQ6P988 496 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 BBS12Q6ZW61 710 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 LRRC6Q86X45 466 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 CCT6BQ92526 530 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 RNF39Q9H2S5 420 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 UBP1Q9NZI7 540 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 SHOC2Q9UQ13 582 aa15.96■□□□□ 0.14
TMEM55B-207ENST00000557041 APOC4-APOC2K7ER74 178 aa15.95■□□□□ 0.14
TMEM55B-207ENST00000557041 APOC2P02655 101 aa15.95■□□□□ 0.14
TMEM55B-207ENST00000557041 CYP2F1P24903 491 aa15.95■□□□□ 0.14
TMEM55B-207ENST00000557041 COPS2P61201 443 aa15.95■□□□□ 0.14
TMEM55B-207ENST00000557041 CLDN10P78369 228 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms