RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 MAPRE1Q15691 268 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 DUOXA1Q1HG43 343 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 LY6G5CQ5SRR4 150 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 L1TD1Q5T7N2 865 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 USP49Q70CQ1 688 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 DPH6Q7L8W6 267 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 LIMS2Q7Z4I7 341 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 SYCP3Q8IZU3 236 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 PHTF2Q8N3S3 785 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 MINDY1Q8N5J2 469 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 KIAA1958Q8N8K9 716 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 OR5B17Q8NGF7 314 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 CEP76Q8TAP6 659 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 HPDLQ96IR7 371 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 EPSTI1Q96J88 318 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 CEP295NLQ96MC4 621 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 PCIF1Q9H4Z3 704 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 CAPN10Q9HC96 672 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 EHD2Q9NZN4 543 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 SEL1LQ9UBV2 794 aa9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-227ENST00000556897 PLXND1Q9Y4D7 1925 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 FAM221BA6H8Z2 402 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 TBC1D3BA6NDS4 549 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 H0Y626 953 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 TRIM66O15016 1216 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 TRIM16O95361 564 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 BMP15O95972 392 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 CAPNS1P04632 268 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 CD59P13987 128 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 GAP43P17677 238 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 GABRG2P18507 467 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 GARTP22102 1010 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 WARSP23381 471 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 GJB2P29033 226 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 RDXP35241 583 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 TNFRSF4P43489 277 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 ZNF33AQ06730 810 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 SF3A1Q15459 793 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 MDH1BQ5I0G3 518 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 PROSER1Q86XN7 944 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 ZNF513Q8N8E2 541 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 MYCBPAPQ8TBZ2 947 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 ANKRD36BP1Q96IX9 119 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 C8orf48Q96LL4 319 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 MMS19Q96T76 1030 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 TMEM30AQ9NV96 361 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 INTS13Q9NVM9 706 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 CALCOCO1Q9P1Z2 691 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 TBC1D14Q9P2M4 693 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 NME7Q9Y5B8 376 aa9.62□□□□□ -0.87
HNRNPC-227ENST00000556897 PCDH15Q96QU1 1955 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 CEP192Q8TEP8 1941 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 COCHO43405 550 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 TULP3O75386 442 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 TNNC2P02585 160 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 HOXB2P14652 356 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 IDEP14735 1019 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 GNL1P36915 607 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 WASP42768 502 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 GAD2Q05329 585 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 SCAPQ12770 1279 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ZNF423Q2M1K9 1284 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 C10orf76Q5T2E6 689 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 TDRD10Q5VZ19 366 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 BTBD8Q5XKL5 378 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 C19orf48Q6RUI8 117 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 SLC36A4Q6YBV0 504 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 RAB44Q7Z6P3 723 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 MIB1Q86YT6 1006 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 CBWD2Q8IUF1 395 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ETFBKMTQ8IXQ9 262 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 GPD1LQ8N335 351 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 TRIML1Q8N9V2 468 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 DNAJC19Q96DA6 116 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ERLEC1Q96DZ1 483 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ZFRQ96KR1 1074 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 HSPA12BQ96MM6 686 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 CAMK1GQ96NX5 476 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 SLITRK1Q96PX8 696 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 MRPL45Q9BRJ2 306 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ZNF518BQ9C0D4 1074 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 OLFML3Q9NRN5 406 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 DEC1Q9P2X7 70 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 STK17AQ9UEE5 414 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 GPSM3Q9Y4H4 160 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ASXL3Q9C0F0 2248 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 NBEAQ8NFP9 2946 aa9.61□□□□□ -0.87
HNRNPC-227ENST00000556897 ADAMTS20P59510 1910 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 IGHV1OR15-9A0A0B4J2B8 117 aa9.6□□□□□ -0.87
HNRNPC-227ENST00000556897 A0A1W2PQF6 199 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms