RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 Q8NA96 180 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 SCAMP4Q969E2 229 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 NACC2Q96BF6 587 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 PTCD3Q96EY7 689 aaKnown RBP6.22□□□□□ -1.41
HIF1A-209ENST00000556827 MRGPRX1Q96LB2 322 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 AIFM2Q9BRQ8 373 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 PRDM13Q9H4Q3 707 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 ADARB2Q9NS39 739 aaKnown RBP6.22□□□□□ -1.41
HIF1A-209ENST00000556827 TMEM74BQ9NUR3 256 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 ZDHHC8Q9ULC8 765 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 L1RE1Q9UN81 338 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 DMTF1Q9Y222 760 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 C5P01031 1676 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 KAT6BQ8WYB5 2073 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 USP42Q9H9J4 1324 aaKnown RBP6.22□□□□□ -1.41
HIF1A-209ENST00000556827 PXDNLA1KZ92 1463 aa6.22□□□□□ -1.41
HIF1A-209ENST00000556827 CFAP69A5D8W1 941 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 FAM227AF5H4B4 570 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 M0QYG6 137 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 KIF20AO95235 890 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 VEGFAP15692 232 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-209ENST00000556827 NPR1P16066 1061 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 KCNJ5P48544 419 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 C21orf58P58505 322 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 MRPS35P82673 323 aaKnown RBP6.21□□□□□ -1.42
HIF1A-209ENST00000556827 MC2RQ01718 297 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 HABP2Q14520 560 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-209ENST00000556827 CYP2A13Q16696 494 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 SULT6B1Q6IMI4 303 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 MAEAQ7L5Y9 396 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 CHST15Q7LFX5 561 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-209ENST00000556827 USP37Q86T82 979 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 DGKHQ86XP1 1220 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 NELL1Q92832 810 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 FUBP1Q96AE4 644 aaKnown RBP6.21□□□□□ -1.42
HIF1A-209ENST00000556827 PCGF6Q9BYE7 350 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 C22orf23Q9BZE7 217 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 TINAGL1Q9GZM7 467 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-209ENST00000556827 BHMT2Q9H2M3 363 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 FAM204AQ9H8W3 233 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 PANK3Q9H999 370 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 RLIMQ9NVW2 624 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 CTTNBP2NLQ9P2B4 639 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 NCAPD2Q15021 1401 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 C10orf71Q711Q0 1435 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 COL24A1Q17RW2 1714 aa6.21□□□□□ -1.42
HIF1A-209ENST00000556827 KDRP35968 1356 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 A0A1W2PPL8 197 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 H0YIN7 160 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 STARD3NLO95772 234 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 ANXA1P04083 346 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 CHRM3P20309 590 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 KCNA3P22001 575 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 CHRNA5P30532 468 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 VAV2P52735 878 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 ELLP55199 621 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-209ENST00000556827 GPSM2P81274 684 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 ZNF844Q08AG5 666 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 GEN1Q17RS7 908 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 KIAA0753Q2KHM9 967 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 PPP4R4Q6NUP7 873 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 TAPT1Q6NXT6 567 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 APOA5Q6Q788 366 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 TTC5Q8N0Z6 440 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 DNAJC5GQ8N7S2 189 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 IL31RAQ8NI17 732 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 ACTRT2Q8TDY3 377 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 NTN5Q8WTR8 489 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-209ENST00000556827 TRIB1Q96RU8 372 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 SPATA5L1Q9BVQ7 753 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 UNKLQ9H9P5 680 aaKnown RBP6.2□□□□□ -1.42
HIF1A-209ENST00000556827 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-209ENST00000556827 SRP68Q9UHB9 627 aaKnown RBP6.2□□□□□ -1.42
HIF1A-209ENST00000556827 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-209ENST00000556827 PCDHGB6Q9Y5F9 930 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 SALL3Q9BXA9 1300 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 CLSPNQ9HAW4 1339 aa6.2□□□□□ -1.42
HIF1A-209ENST00000556827 CICQ96RK0 1608 aaPredicted RBP6.19□□□□□ -1.42
HIF1A-209ENST00000556827 TRGV11A0A075B6L2 103 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 POLRMTO00411 1230 aaKnown RBP6.19□□□□□ -1.42
HIF1A-209ENST00000556827 DNAJB5O75953 348 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 UNC5CO95185 931 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 GNAI2P04899 355 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 SIM1P81133 766 aaPredicted RBP6.19□□□□□ -1.42
HIF1A-209ENST00000556827 BOP1Q14137 746 aaKnown RBP6.19□□□□□ -1.42
HIF1A-209ENST00000556827 ZNF169Q14929 603 aaPredicted RBP6.19□□□□□ -1.42
HIF1A-209ENST00000556827 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
HIF1A-209ENST00000556827 EMC10Q5UCC4 262 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 RNF220Q5VTB9 566 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 FAM46DQ8NEK8 389 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 MED15Q96RN5 788 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 SMOQ99835 787 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 SMOC2Q9H3U7 446 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 CNNM1Q9NRU3 951 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 KCTD5Q9NXV2 234 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 ETAA1Q9NY74 926 aa6.19□□□□□ -1.42
HIF1A-209ENST00000556827 CCDC195A0A1B0GUA6 201 aa6.18□□□□□ -1.42
HIF1A-209ENST00000556827 MYADML2A6NDP7 307 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms