RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CCDC150Q8NCX0 1101 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 OSCP1Q8WVF1 389 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 TMEM176AQ96HP8 235 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 HEXIM2Q96MH2 286 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 SLITRK1Q96PX8 696 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 NELL2Q99435 816 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 C8orf33Q9H7E9 229 aaPredicted RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 CCSER2Q9H7U1 834 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 NMUR1Q9HB89 426 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 METTL14Q9HCE5 456 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 THG1LQ9NWX6 298 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 OSER1Q9NX31 292 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 DUS2Q9NX74 493 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 MRPS17Q9Y2R5 130 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 CPQQ9Y646 472 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 R4GN57 208 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 ZNF638Q14966 1978 aaKnown RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 MIA3Q5JRA6 1907 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 BICDL2A1A5D9 508 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 ANTXRLA6NF34 631 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 PROB1E7EW31 1015 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 RNF225M0QZC1 329 aaPredicted RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 MDM4O15151 490 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 PMM2O15305 246 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 CYP26A1O43174 497 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 TBX18O95935 607 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 MBL2P11226 248 aaPredicted RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 TCF3P15923 654 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 ACO1P21399 889 aaKnown RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 PPP3CCP48454 512 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 KIF11P52732 1056 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 MARSP56192 900 aaKnown RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 SATB1Q01826 763 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 APBA1Q02410 837 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 PDGFRLQ15198 375 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 GAB4Q2WGN9 574 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 DPCR1Q3MIW9 517 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 HECTD3Q5T447 861 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 SNX30Q5VWJ9 437 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 FSTL4Q6MZW2 842 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 CC2D1AQ6P1N0 951 aaPredicted RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 PKN3Q6P5Z2 889 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 RRAGAQ7L523 313 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 ASCL5Q7RTU5 278 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 SCD5Q86SK9 330 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 TTC30AQ86WT1 665 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 RALGPS2Q86X27 583 aaPredicted RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 ARHGEF19Q8IW93 802 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 OVCA2Q8WZ82 227 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 EZH1Q92800 747 aaPredicted RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 FAXDC2Q96IV6 333 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 KREMEN1Q96MU8 473 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 ZSWIM1Q9BR11 485 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 DUSP16Q9BY84 665 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 CHRDQ9H2X0 955 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 POLR3BQ9NW08 1133 aaPredicted RBP8.57□□□□□ -1.04
VTI1B-206ENST00000556461 EHD2Q9NZN4 543 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 CFAP97Q9P2B7 532 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 RWDD2AQ9UIY3 292 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 FAM186AA6NE01 2351 aa8.57□□□□□ -1.04
VTI1B-206ENST00000556461 A0A1W2PQH9 124 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 NCAM2O15394 837 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 LAMTOR5O43504 91 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 EGFP01133 1207 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 AFPP02771 609 aaKnown RBP8.56□□□□□ -1.04
VTI1B-206ENST00000556461 TDGF1P13385 188 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 PFKLP17858 780 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 GJA4P35212 333 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 IFNAR2P48551 515 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 GALK1P51570 392 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 CSTF1Q05048 431 aaKnown RBP8.56□□□□□ -1.04
VTI1B-206ENST00000556461 DMWDQ09019 674 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 MESP2Q0VG99 397 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 CCINQ13939 588 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 GOLGA7BQ2TAP0 167 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 ARHGAP17Q68EM7 881 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 PIGZQ86VD9 579 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 EHBP1Q8NDI1 1231 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 PDZD8Q8NEN9 1154 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 TFAP2BQ92481 460 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 NDRG1Q92597 394 aaKnown RBP8.56□□□□□ -1.04
VTI1B-206ENST00000556461 MSANTD3Q96H12 275 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 CNOT6LQ96LI5 555 aaKnown RBP8.56□□□□□ -1.04
VTI1B-206ENST00000556461 NT5C1BQ96P26 610 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 INTS2Q9H0H0 1204 aaKnown RBP8.56□□□□□ -1.04
VTI1B-206ENST00000556461 IRF2BPLQ9H1B7 796 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 NUP62CLQ9H1M0 184 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 PRMT8Q9NR22 394 aaPredicted RBP8.56□□□□□ -1.04
VTI1B-206ENST00000556461 COMMD8Q9NX08 183 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 NUDT5Q9UKK9 219 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 SCML2Q9UQR0 700 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 USP3Q9Y6I4 520 aa8.56□□□□□ -1.04
VTI1B-206ENST00000556461 OTOGLQ3ZCN5 2332 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PATJQ8NI35 1801 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PRR23AA6NEV1 266 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 O00370 1275 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms