RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 RNF38Q9H0F5 515 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 RBM12Q9NTZ6 932 aaKnown RBP13.36□□□□□ -0.27
SNX6-207ENST00000556303 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 RAB23Q9ULC3 237 aa13.36□□□□□ -0.27
SNX6-207ENST00000556303 E2F8A0AVK6 867 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 CILPO75339 1184 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 FAM200BP0CF97 657 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
SNX6-207ENST00000556303 MXI1P50539 228 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 ZXDBP98169 803 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 STIM1Q13586 685 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 SPOPLQ6IQ16 392 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 Q6ZS52 159 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 ADGRG2Q8IZP9 1017 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 FBXL13Q8NEE6 735 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 SLC2A14Q8TDB8 520 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 CD101Q93033 1021 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 SMOQ99835 787 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 APOBEC3GQ9HC16 384 aaKnown RBP13.35□□□□□ -0.27
SNX6-207ENST00000556303 KRT82Q9NSB4 513 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 RAB20Q9NX57 234 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 SMG5Q9UPR3 1016 aaKnown RBP13.35□□□□□ -0.27
SNX6-207ENST00000556303 PCDHA5Q9Y5H7 936 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 CPQQ9Y646 472 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
SNX6-207ENST00000556303 LRP3O75074 770 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 ABL1P00519 1130 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 MBL2P11226 248 aaPredicted RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 PREPLQ4J6C6 727 aaPredicted RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 LAIR1Q6GTX8 287 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 ZMIZ2Q8NF64 920 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 SCAMP5Q8TAC9 235 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 ACDQ96AP0 544 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 CYFIP2Q96F07 1278 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 METTL14Q9HCE5 456 aaKnown RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 TLR8Q9NR97 1041 aaKnown RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 NCDNQ9UBB6 729 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
SNX6-207ENST00000556303 SCML2Q9UQR0 700 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 COQ4Q9Y3A0 265 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 MYH10P35580 1976 aa13.34□□□□□ -0.27
SNX6-207ENST00000556303 HELZP42694 1942 aaKnown RBP13.33□□□□□ -0.28
SNX6-207ENST00000556303 PSMA7O14818 248 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 PMM2O15305 246 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 EGFP01133 1207 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 SDHBP21912 280 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 PSEN1P49768 467 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 MAP3K7CLP57077 242 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 KLHDC10Q6PID8 442 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 TADA2BQ86TJ2 420 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 SMYD4Q8IYR2 804 aaPredicted RBP13.33□□□□□ -0.28
SNX6-207ENST00000556303 ZNF276Q8N554 614 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 C12orf29Q8N999 325 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 WHAMMQ8TF30 809 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 SLC8A2Q9UPR5 921 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 ATG2BQ96BY7 2078 aa13.33□□□□□ -0.28
SNX6-207ENST00000556303 A0A0A0MRY4 1105 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 COCHO43405 550 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 FOXD2O60548 495 aaPredicted RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 RNF40O75150 1001 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 BEST1O76090 585 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 ADH1CP00326 375 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 RETP07949 1114 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 CCDC130P13994 396 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 ID4P47928 161 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 IFRD2Q12894 506 aaPredicted RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 SIM2Q14190 667 aaPredicted RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 DHCR24Q15392 516 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 HSF5Q4G112 596 aaPredicted RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 CLEC20AQ6ZU45 233 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 ERMP1Q7Z2K6 904 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 FILIP1Q7Z7B0 1213 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 TWNKQ96RR1 684 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 CDK5RAP1Q96SZ6 601 aaKnown RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 DUSP16Q9BY84 665 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 CYLDQ9NQC7 956 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 FAM49BQ9NUQ9 324 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 CFAP97Q9P2B7 532 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 ARMCX3Q9UH62 379 aaPredicted RBP13.32□□□□□ -0.28
SNX6-207ENST00000556303 SDK1Q7Z5N4 2213 aa13.32□□□□□ -0.28
SNX6-207ENST00000556303 SPAG17Q6Q759 2223 aa13.31□□□□□ -0.28
SNX6-207ENST00000556303 PRR5-ARHGAP8B1AHC4 643 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms