RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HESX1Q9UBX0 185 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 SCML2Q9UQR0 700 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 SIT1Q9Y3P8 196 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 MTF2Q9Y483 593 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-217ENST00000556203 CPQQ9Y646 472 aa16.03■□□□□ 0.16
ACTN1-217ENST00000556203 COL4A3Q01955 1670 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 SHISA7A6NL88 538 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 LEFTY2O00292 366 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 COCHO43405 550 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 CALCAP01258 141 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 DCNP07585 359 aaKnown RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 MBL2P11226 248 aaPredicted RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 BRD2P25440 801 aaKnown RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 SOX9P48436 509 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 TUBP50607 506 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 ZNF132P52740 706 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 BCAT1P54687 386 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 MFAP3P55082 362 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 ZXDBP98169 803 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 TYRO3Q06418 890 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 PDE4CQ08493 712 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 BST2Q10589 180 aaKnown RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 TRIM68Q6AZZ1 485 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 ENOSF1Q7L5Y1 443 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 PJA1Q8NG27 643 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 UBA3Q8TBC4 463 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 FAM81BQ96LP2 452 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 FAM83CQ9BQN1 747 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 UBXN6Q9BZV1 441 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 LTB4R2Q9NPC1 389 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 TLR8Q9NR97 1041 aaKnown RBP16.02■□□□□ 0.16
ACTN1-217ENST00000556203 FANCLQ9NW38 375 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 APEX2Q9UBZ4 518 aa16.02■□□□□ 0.16
ACTN1-217ENST00000556203 FAM170BA6NMN3 283 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 TULP2O00295 520 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 MAN2B1O00754 1011 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 XPO1O14980 1071 aaKnown RBP16.01■□□□□ 0.15
ACTN1-217ENST00000556203 GLULP15104 373 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 TCF3P15923 654 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 MYL5Q02045 173 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 CDKAL1Q5VV42 579 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 OSCP1Q8WVF1 389 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 FAM3CQ92520 227 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 NACA2Q9H009 215 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 EBF3Q9H4W6 596 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 SIX2Q9NPC8 291 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 HPS4Q9NQG7 708 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 OSER1Q9NX31 292 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 DUS2Q9NX74 493 aaKnown RBP16.01■□□□□ 0.15
ACTN1-217ENST00000556203 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.01■□□□□ 0.15
ACTN1-217ENST00000556203 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 MRPS17Q9Y2R5 130 aaKnown RBP16.01■□□□□ 0.15
ACTN1-217ENST00000556203 WNT6Q9Y6F9 365 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 USP3Q9Y6I4 520 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 GREB1Q4ZG55 1949 aa16.01■□□□□ 0.15
ACTN1-217ENST00000556203 NUP210Q8TEM1 1887 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-217ENST00000556203 A0A1W2PQH9 124 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 M0QYV0 167 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 TLR5O60602 858 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 ARSAP15289 507 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
ACTN1-217ENST00000556203 IFNAR2P48551 515 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 NUBP1P53384 320 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 MLLT6P55198 1093 aaPredicted RBP16■□□□□ 0.15
ACTN1-217ENST00000556203 RUNX3Q13761 415 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 PDGFRLQ15198 375 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 CNGA2Q16280 664 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 ARHGAP44Q17R89 818 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 ITPRIPL2Q3MIP1 535 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 PKDCCQ504Y2 493 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 RAB41Q5JT25 222 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 CCDC105Q8IYK2 499 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 PRSS33Q8NF86 280 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 MSANTD3Q96H12 275 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 PRRX2Q99811 253 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 KCNH6Q9H252 994 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 C8orf33Q9H7E9 229 aaPredicted RBP16■□□□□ 0.15
ACTN1-217ENST00000556203 NMUR1Q9HB89 426 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 CFAP97Q9P2B7 532 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 AJAP1Q9UKB5 411 aaPredicted RBP16■□□□□ 0.15
ACTN1-217ENST00000556203 NDRG2Q9UN36 371 aaKnown RBP16■□□□□ 0.15
ACTN1-217ENST00000556203 TRIOO75962 3097 aa16■□□□□ 0.15
ACTN1-217ENST00000556203 OBSL1O75147 1896 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 ZDBF2Q9HCK1 2354 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 SPECC1L-ADORA2AF8WAN1 911 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 GALR2O43603 387 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-217ENST00000556203 TBX18O95935 607 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 SETSIPP0DME0 302 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 CTHP32929 405 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 USP8P40818 1118 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 PLA2G4AP47712 749 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 TKTL1P51854 596 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 KRT31Q15323 416 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms