RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 MAGEC2Q9UBF1 373 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 GMEB2Q9UKD1 530 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 CFAP45Q9UL16 551 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 CDH9Q9ULB4 789 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 USP18Q9UMW8 372 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 PCDHA7Q9UN72 937 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 ZZEF1O43149 2961 aa7.15□□□□□ -1.27
PSEN1-216ENST00000556066 EML5Q05BV3 1969 aa7.15□□□□□ -1.27
PSEN1-216ENST00000556066 C2orf78A6NCI8 922 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 OTOL1A6NHN0 477 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 EXOC3O60645 756 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 TADA3O75528 432 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 NOL4O94818 638 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 UBE4BO95155 1302 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 ABL1P00519 1130 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CST3P01034 146 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 USP17L7P0C7H9 530 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 TDGF1P13385 188 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 HDCP19113 662 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 WARSP23381 471 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 GNL1P36915 607 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 MAGEA11P43364 429 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 IFNAR2P48551 515 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CASP4P49662 377 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 TNNC1P63316 161 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 AMPD2Q01433 879 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CYP24A1Q07973 514 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 GRSF1Q12849 480 aaKnown RBP eCLIP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 IFRD2Q12894 506 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 BIRC3Q13489 604 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CCINQ13939 588 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 SIM2Q14190 667 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 KCNB1Q14721 858 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 MTF1Q14872 753 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 PSMD6Q15008 389 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 MAPRE1Q15691 268 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 KNOP1Q1ED39 458 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 RSPO4Q2I0M5 234 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 WDR72Q3MJ13 1102 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CFAP221Q4G0U5 840 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 MDH1BQ5I0G3 518 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 RESP18Q5W5W9 173 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CNNM4Q6P4Q7 775 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 FAM171BQ6P995 826 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CEP68Q76N32 757 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CPA6Q8N4T0 437 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 ARL14EPQ8N8R7 260 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 RIN3Q8TB24 985 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 FOXJ1Q92949 421 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 TRMT2BQ96GJ1 504 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 PCED1BQ96HM7 432 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 FUBP3Q96I24 572 aaKnown RBP eCLIP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 MYRFLQ96LU7 910 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 SLC22A12Q96S37 553 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CGRRF1Q99675 332 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 FAM83CQ9BQN1 747 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 MRPL45Q9BRJ2 306 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 CRTAC1Q9NQ79 661 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 EXOC1Q9NV70 894 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 C2orf42Q9NWW7 574 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 DUS2Q9NX74 493 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 SERTAD1Q9UHV2 236 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 WNT6Q9Y6F9 365 aa7.14□□□□□ -1.27
PSEN1-216ENST00000556066 SETXQ7Z333 2677 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 FLNBO75369 2602 aaKnown RBP7.14□□□□□ -1.27
PSEN1-216ENST00000556066 KIAA1549LQ6ZVL6 1849 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 PVALEFA0A1B0GWK0 134 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 SOBPA7XYQ1 873 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 A8MXQ7 604 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 F8VP50 259 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 K7ESF4 209 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 CLDN5O00501 218 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 EGFP01133 1207 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 PTPN1P18031 435 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 HOXC13P31276 330 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 PXNP49023 591 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 MYL6P60660 151 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 SNRPFP62306 86 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 FAM160A1Q05DH4 1040 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 EHHADHQ08426 723 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 SPEM2Q0P670 501 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 PSMD2Q13200 908 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 ZNF268Q14587 947 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 PDGFRLQ15198 375 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 TMEM196Q5HYL7 178 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 NAIF1Q69YI7 327 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 ATL3Q6DD88 541 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 LAIR1Q6GTX8 287 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 FSTL4Q6MZW2 842 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 PKN3Q6P5Z2 889 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 VSTM1Q6UX27 236 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 DENND5BQ6ZUT9 1274 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 LIMS2Q7Z4I7 341 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 LONP2Q86WA8 852 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 SYNPOQ8N3V7 929 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 MYCBPAPQ8TBZ2 947 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 ADAM32Q8TC27 787 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms