RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SLC26A2P50443 739 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 RAD23BP54727 409 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 YWHAGP61981 247 aaKnown RBP eCLIP7.3□□□□□ -1.24
TDP1-213ENST00000555880 ZNF200P98182 395 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 TNFAIP2Q03169 654 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PTPN11Q06124 597 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 PTK7Q13308 1070 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 DPYSL3Q14195 570 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 KRT81Q14533 505 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CRYMQ14894 314 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PWP2Q15269 919 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 LY6KQ17RY6 165 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 MSS51Q4VC12 460 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TAF1BQ53T94 588 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 SH3D19Q5HYK7 790 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 SCARA3Q6AZY7 606 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TLDC1Q6P9B6 456 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LBX2Q6XYB7 198 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PLPPR4Q7Z2D5 763 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 UNC45BQ8IWX7 931 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TTC39CQ8N584 583 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TAB3Q8N5C8 712 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 EMC1Q8N766 993 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 BANPQ8N9N5 519 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CMASQ8NFW8 434 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 TCP10LQ8TDR4 215 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 DCAKDQ8WVC6 231 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 APOPT1Q96IL0 206 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CNPY3Q9BT09 278 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TSSK1BQ9BXA7 367 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 MANSC1Q9H8J5 431 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 C10orf88Q9H8K7 445 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CYP3A43Q9HB55 503 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.3□□□□□ -1.24
TDP1-213ENST00000555880 GGA3Q9NZ52 723 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CHMP2BQ9UQN3 213 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TNFSF13BQ9Y275 285 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 A0A0G2JMZ2 1700 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LRRC37A2A6NM11 1700 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 MGAMO43451 1857 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 IGKV6-21A0A0C4DH24 114 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 WDR91A4D1P6 747 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CFAP69A5D8W1 941 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 H7C0C1 242 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ABLIM1O14639 778 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CHADO15335 359 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 KIF1CO43896 1103 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 CILPO75339 1184 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LGR5O75473 907 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 MICAL2O94851 1124 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TMEM63AO94886 807 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LMNAP02545 664 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 CD48P09326 243 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 VDRP11473 427 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 GPD1P21695 349 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ELK3P41970 407 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PSMC4P43686 418 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 GABRB2P47870 512 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ATP5OP48047 213 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ZNF143P52747 638 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 CDH6P55285 790 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 GAD2Q05329 585 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ZBTB16Q05516 673 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 KYAT1Q16773 422 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LGSNQ5TDP6 509 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 DPH6Q7L8W6 267 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 EEPD1Q7L9B9 569 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 LONP2Q86WA8 852 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ARFGAP1Q8N6T3 406 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 ANKLE1Q8NAG6 615 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 SLC4A11Q8NBS3 891 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 DCPSQ96C86 337 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 FAF2Q96CS3 445 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 MCRS1Q96EZ8 462 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 TMEM176AQ96HP8 235 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 HEXIM2Q96MH2 286 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 SPATA33Q96N06 139 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 GPR20Q99678 358 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 SPATC1LQ9H0A9 340 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CDT1Q9H211 546 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 FZD8Q9H461 694 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 SMARCAD1Q9H4L7 1026 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 SMYD3Q9H7B4 428 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PTPRHQ9HD43 1115 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 PRMT7Q9NVM4 692 aaPredicted RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 PAK5Q9P286 719 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 CYTH4Q9UIA0 394 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 DCTN4Q9UJW0 460 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 RPL26L1Q9UNX3 145 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.3□□□□□ -1.24
TDP1-213ENST00000555880 MTO1Q9Y2Z2 717 aaKnown RBP7.3□□□□□ -1.24
TDP1-213ENST00000555880 PTPRFP10586 1907 aa7.3□□□□□ -1.24
TDP1-213ENST00000555880 BRCA1P38398 1863 aaKnown RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 A0A0G2JND7 137 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TCRBV9S1A1TA0A576 114 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 I3L4J1 428 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 GOLGA8RI6L899 631 aa7.29□□□□□ -1.24
TDP1-213ENST00000555880 TRAFD1O14545 582 aaPredicted RBP7.29□□□□□ -1.24
TDP1-213ENST00000555880 COPEO14579 308 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms