RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ADIGQ0VDE8 80 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 PTP4A2Q12974 167 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 EFHC1Q5JVL4 640 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 MMS22LQ6ZRQ5 1243 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 GPRIN1Q7Z2K8 1008 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 MON1AQ86VX9 555 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 TXLNBQ8N3L3 684 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 PDZD8Q8NEN9 1154 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 SCAMP5Q8TAC9 235 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 GUCD1Q96NT3 240 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 SLITRK1Q96PX8 696 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 ASNSD1Q9NWL6 643 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 TRANK1O15050 2925 aa13.11□□□□□ -0.31
SHMT2-221ENST00000555773 ZNF263O14978 683 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 CCL16O15467 120 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 PAPSS1O43252 624 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-221ENST00000555773 ERBB2P04626 1255 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 GLI1P08151 1106 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 USP17L7P0C7H9 530 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 FOSL2P15408 326 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 PSEN1P49768 467 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 EPHA5P54756 1037 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 GALCP54803 685 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 USP46P62068 366 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
SHMT2-221ENST00000555773 SLC6A3Q01959 620 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 ITIH3Q06033 890 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 TAF10Q12962 218 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 MTMR3Q13615 1198 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 MTF1Q14872 753 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 CYP4A22Q5TCH4 519 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 OR6B2Q6IFH4 312 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 BEND5Q7L4P6 421 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 ARCQ7LC44 396 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 XYLT1Q86Y38 959 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 GOLGA1Q92805 767 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 FBXO32Q969P5 355 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 ZNF707Q96C28 371 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-221ENST00000555773 MCRS1Q96EZ8 462 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 TRIM62Q9BVG3 475 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 ULBP1Q9BZM6 244 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-221ENST00000555773 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 CLDND1Q9NY35 253 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 CLEC1BQ9P126 229 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 MAGED2Q9UNF1 606 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-221ENST00000555773 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 NCANO14594 1321 aa13.1□□□□□ -0.31
SHMT2-221ENST00000555773 ZNF197O14709 1029 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 LINC01565O15544 149 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 TMEM253P0C7T8 217 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 CDC25CP30307 473 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 DAOAP59103 153 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 CES5AQ6NT32 575 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 OLFML1Q6UWY5 402 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 SLC26A9Q7LBE3 791 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 ZNF276Q8N554 614 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 C3orf20Q8ND61 904 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 SMG7Q92540 1137 aaKnown RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 LRRC3Q9BY71 257 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 PIDD1Q9HB75 910 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 MRPL47Q9HD33 250 aaKnown RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 ASAH2Q9NR71 780 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 TRPM5Q9NZQ8 1165 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 DNMT3BQ9UBC3 853 aaKnown RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-221ENST00000555773 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 CDH23Q9H251 3354 aa13.09□□□□□ -0.31
SHMT2-221ENST00000555773 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 PIK3R2O00459 728 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 F11P03951 625 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 CYP1A2P05177 515 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 KRT3P12035 628 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 RRM1P23921 792 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 LTBRP36941 435 aa13.08□□□□□ -0.32
SHMT2-221ENST00000555773 YWHAZP63104 245 aaKnown RBP13.08□□□□□ -0.32
SHMT2-221ENST00000555773 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-221ENST00000555773 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms