RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TAAR9Q96RI9 348 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 MAP3K14Q99558 947 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 BHMT2Q9H2M3 363 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 NMRK2Q9NPI5 230 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 CNNM1Q9NRU3 951 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 KAT6BQ8WYB5 2073 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 FNDC1Q4ZHG4 1894 aaPredicted RBP6.26□□□□□ -1.41
VRK1-203ENST00000555067 PRRT4C9JH25 899 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 F5H423 210 aaPredicted RBP6.26□□□□□ -1.41
VRK1-203ENST00000555067 EXOC5O00471 708 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 TJP3O95049 919 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 HSP90AA1P07900 732 aaKnown RBP6.26□□□□□ -1.41
VRK1-203ENST00000555067 LRPAP1P30533 357 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 TPTEP56180 551 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 ZNF267Q14586 743 aaPredicted RBP6.26□□□□□ -1.41
VRK1-203ENST00000555067 LONRF1Q17RB8 773 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 KHDC1LQ5JSQ8 128 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 SLC18B1Q6NT16 456 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 TRIM72Q6ZMU5 477 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 DENND1AQ8TEH3 1009 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 FCRL4Q96PJ5 515 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 SELENOOQ9BVL4 669 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 TBC1D30Q9Y2I9 924 aa6.26□□□□□ -1.41
VRK1-203ENST00000555067 A1L4Q6 167 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 H7C1Q1 480 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 CYP2C9P11712 490 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 RENBPP51606 427 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 CYP4F2P78329 520 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 SP2Q02086 613 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 ETFDHQ16134 617 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 KLHL22Q53GT1 634 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 CEP78Q5JTW2 689 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 MTHFD1LQ6UB35 978 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 NAPRTQ6XQN6 538 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 POF1BQ8WVV4 589 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 GLG1Q92896 1179 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 HPS3Q969F9 1004 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 ZNF48Q96MX3 618 aaPredicted RBP6.25□□□□□ -1.41
VRK1-203ENST00000555067 NDRG4Q9ULP0 352 aaKnown RBP6.25□□□□□ -1.41
VRK1-203ENST00000555067 PCDHA6Q9UN73 950 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 MED16Q9Y2X0 877 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 CACNA1IQ9P0X4 2223 aa6.25□□□□□ -1.41
VRK1-203ENST00000555067 TPP1O14773 563 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 ADAMTS3O15072 1205 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 MOSPD3O75425 235 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 BMP15O95972 392 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 THP07101 528 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 DLDP09622 509 aaKnown RBP6.24□□□□□ -1.41
VRK1-203ENST00000555067 ZKSCAN1P17029 563 aaPredicted RBP6.24□□□□□ -1.41
VRK1-203ENST00000555067 PDE6CP51160 858 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 WNT3P56703 355 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 BIRC3Q13489 604 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 TBC1D25Q3MII6 688 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 ATAT1Q5SQI0 421 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 CATSPERGQ6ZRH7 1159 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 MMS22LQ6ZRQ5 1243 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 Q6ZWC4 215 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
VRK1-203ENST00000555067 NKAPQ8N5F7 415 aaKnown RBP6.24□□□□□ -1.41
VRK1-203ENST00000555067 CYP2W1Q8TAV3 490 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 SOCS4Q8WXH5 440 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 R3HDM4Q96D70 268 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 DAZAP1Q96EP5 407 aaKnown RBP6.24□□□□□ -1.41
VRK1-203ENST00000555067 ASB2Q96Q27 587 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 ADGRE3Q9BY15 652 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 XPR1Q9UBH6 696 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 PCDHGB3Q9Y5G1 929 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 DGKBQ9Y6T7 804 aa6.24□□□□□ -1.41
VRK1-203ENST00000555067 OFD1O75665 1012 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 XRCC6P12956 609 aaKnown RBP eCLIP6.23□□□□□ -1.41
VRK1-203ENST00000555067 TUBB8Q3ZCM7 444 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 SUPT20HL1Q3ZLR7 823 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 ZNF280DQ6N043 979 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 LVRNQ6Q4G3 990 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 SLC15A3Q8IY34 581 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 GALNT16Q8N428 558 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 PDILTQ8N807 584 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 PNLDC1Q8NA58 520 aaKnown RBP6.23□□□□□ -1.41
VRK1-203ENST00000555067 ZBTB34Q8NCN2 500 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 ACRBPQ8NEB7 543 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 ABHD11Q8NFV4 315 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 XAGE5Q8WWM1 108 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 C1GALT1C1Q96EU7 318 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 CGRRF1Q99675 332 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 ACO2Q99798 780 aaKnown RBP6.23□□□□□ -1.41
VRK1-203ENST00000555067 QTRT1Q9BXR0 403 aaKnown RBP6.23□□□□□ -1.41
VRK1-203ENST00000555067 CCNL1Q9UK58 526 aaPredicted RBP6.23□□□□□ -1.41
VRK1-203ENST00000555067 TMX2Q9Y320 296 aa6.23□□□□□ -1.41
VRK1-203ENST00000555067 CCER2I3L3R5 266 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 MYO1CO00159 1063 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 ZBED1O96006 694 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 ALDH2P05091 517 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 GPSM2P81274 684 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 TRIM14Q14142 442 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 CERKLQ49MI3 558 aaPredicted RBP6.22□□□□□ -1.41
VRK1-203ENST00000555067 L1TD1Q5T7N2 865 aaKnown RBP6.22□□□□□ -1.41
VRK1-203ENST00000555067 SRGAP1Q7Z6B7 1085 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 CHSY1Q86X52 802 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms