RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ASPAP45381 313 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 FMO1Q01740 532 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 PPP1R2P3Q6NXS1 205 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 TMC3Q7Z5M5 1100 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 CD101Q93033 1021 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 PCDHB18PQ96TA0 734 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 RTP3Q9BQQ7 232 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 NXF1Q9UBU9 619 aaKnown RBP18.28■□□□□ 0.52
SHOX-204ENST00000554971 STK39Q9UEW8 545 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 RSPH14Q9UHP6 348 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 PCDHA3Q9Y5H8 950 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 EBAG9O00559 213 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 ADAM12O43184 909 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 HCRTO43612 131 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 TBC1D4O60343 1298 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 URODP06132 367 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 MYBL1P10243 752 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 ODC1P11926 461 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 PAX3P23760 479 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 CYP1B1Q16678 543 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 ACAD10Q6JQN1 1059 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 ALG3Q92685 438 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 TATDN2Q93075 761 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 SDCBP2Q9H190 292 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 SMYD3Q9H7B4 428 aa18.27■□□□□ 0.52
SHOX-204ENST00000554971 NGRNQ9NPE2 291 aaKnown RBP18.27■□□□□ 0.52
SHOX-204ENST00000554971 MRPL17Q9NRX2 175 aaKnown RBP18.27■□□□□ 0.52
SHOX-204ENST00000554971 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.51
SHOX-204ENST00000554971 MYO1CO00159 1063 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 OAZ2O95190 189 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 CXCL14O95715 111 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 CNPP09543 421 aaKnown RBP18.27■□□□□ 0.51
SHOX-204ENST00000554971 TYMPP19971 482 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 COMTP21964 271 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 ZNF667Q5HYK9 610 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 KIAA1841Q6NSI8 718 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 SCARA5Q6ZMJ2 495 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 B4GALNT4Q76KP1 1039 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 OSTM1Q86WC4 334 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 C3orf20Q8ND61 904 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 BCAS4Q8TDM0 211 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 FMO2Q99518 471 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 CLSTN3Q9BQT9 956 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 TXLNGYQ9BZA5 131 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 AVENQ9NQS1 362 aaPredicted RBP18.27■□□□□ 0.51
SHOX-204ENST00000554971 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 TRIOO75962 3097 aa18.27■□□□□ 0.51
SHOX-204ENST00000554971 RAP1GAPP47736 663 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 CDH8P55286 799 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 YWHAHQ04917 246 aaPredicted RBP18.26■□□□□ 0.51
SHOX-204ENST00000554971 UAP1Q16222 522 aaPredicted RBP18.26■□□□□ 0.51
SHOX-204ENST00000554971 PSMD5Q16401 504 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 PTPROQ16827 1216 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 DDX42Q86XP3 938 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHOX-204ENST00000554971 TOP6BLQ8N6T0 577 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
SHOX-204ENST00000554971 MAIP1Q8WWC4 291 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 MRPL45Q9BRJ2 306 aaKnown RBP18.26■□□□□ 0.51
SHOX-204ENST00000554971 RXFP1Q9HBX9 757 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 LMCD1Q9NZU5 365 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 MTRRQ9UBK8 725 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 PTPRDP23468 1912 aa18.26■□□□□ 0.51
SHOX-204ENST00000554971 GABRDO14764 452 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 TEX28O15482 410 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 HUS1O60921 280 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 OVOS1Q6IE37 1185 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 SLC47A2Q86VL8 602 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 GPR65Q8IYL9 337 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 APPL2Q8NEU8 664 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 OR10T2Q8NGX3 314 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 DDX1Q92499 740 aaKnown RBP18.25■□□□□ 0.51
SHOX-204ENST00000554971 KAT5Q92993 513 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 BCO2Q9BYV7 579 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 NEUROG2Q9H2A3 272 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 PLEKHA4Q9H4M7 779 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 PER2O15055 1255 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 IGFBP4P22692 258 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 MDH1P40925 334 aaKnown RBP18.25■□□□□ 0.51
SHOX-204ENST00000554971 SLC1A1P43005 524 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 FNTAP49354 379 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 RWDD2BP57060 319 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 DHX9Q08211 1270 aaKnown RBP18.25■□□□□ 0.51
SHOX-204ENST00000554971 ZNF844Q08AG5 666 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 MESDQ14696 234 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 ANKS3Q6ZW76 656 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 DPH6Q7L8W6 267 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 RBM23Q86U06 439 aaKnown RBP18.25■□□□□ 0.51
SHOX-204ENST00000554971 JAMLQ86YT9 394 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 ADGRF2Q8IZF7 708 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 C12orf50Q8NA57 414 aaPredicted RBP18.25■□□□□ 0.51
SHOX-204ENST00000554971 TMEM209Q96SK2 561 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 GAS2L1Q99501 681 aaPredicted RBP18.25■□□□□ 0.51
SHOX-204ENST00000554971 NUP85Q9BW27 656 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 IMPG2Q9BZV3 1241 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 EPN3Q9H201 632 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 ZDHHC18Q9NUE0 388 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 GGA2Q9UJY4 613 aa18.25■□□□□ 0.51
SHOX-204ENST00000554971 ATXN2Q99700 1313 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms