RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PDPR	Q8NCN5	879 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	SLC17A8	Q8NDX2	589 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	TSR2	Q969E8	191 aa	Known RBP	6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	HPS3	Q969F9	1004 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	PRRX2	Q99811	253 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	CDH19	Q9H159	772 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	GBA2	Q9HCG7	927 aa	Predicted RBP	6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	MAN1C1	Q9NR34	630 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	GGA3	Q9NZ52	723 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	ZIM2	Q9NZV7	527 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	TAF1	P21675	1872 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	COL4A3	Q01955	1670 aa		6.3	□□□□□ -1.4
PSMC6-208	ENST00000554956	PIPSL	A2A3N6	862 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	TMEM191C	A6NGB0	347 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956		E9PLN8	166 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	SNAP23	O00161	211 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	B3GALT2	O43825	422 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	ALDH2	P05091	517 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	EGR2	P11161	476 aa	Predicted RBP	6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	RPS12	P25398	132 aa	Known RBP	6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	KLRK1	P26718	216 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	PRDX5	P30044	214 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	RGS19	P49795	217 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	HECTD2	Q5U5R9	776 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	RGMB	Q6NW40	437 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	LCORL	Q8N3X6	602 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	CCDC191	Q8NCU4	936 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	AGAP2	Q99490	1192 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	VKORC1	Q9BQB6	163 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	CYP4F11	Q9HBI6	524 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	GALNT9	Q9HCQ5	603 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	LMBRD1	Q9NUN5	540 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	MRPS18A	Q9NVS2	196 aa	Known RBP	6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	TES	Q9UGI8	421 aa	Known RBP	6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	POLH	Q9Y253	713 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	DMRT1	Q9Y5R6	373 aa		6.29	□□□□□ -1.4
PSMC6-208	ENST00000554956	PI4KAP2	A4QPH2	592 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	PRSS29P	A6NIE9	313 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	ZNF785	A8K8V0	405 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	TSPAN6	O43657	245 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	AP1G1	O43747	822 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	GJB1	P08034	283 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	PROZ	P22891	400 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	GNAI1	P63096	354 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	MC2R	Q01718	297 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	LRRC41	Q15345	812 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	CCDC152	Q4G0S7	254 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	THEMIS2	Q5TEJ8	643 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	PPP1R3B	Q86XI6	285 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	FAM90A1	Q86YD7	464 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	FAM43A	Q8N2R8	423 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	SLC44A3	Q8N4M1	653 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	PI4KAP1	Q8N8J0	262 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	GPR150	Q8NGU9	434 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	TMEM125	Q96AQ2	219 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	DCPS	Q96C86	337 aa	Known RBP	6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	CDCA5	Q96FF9	252 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	BOD1	Q96IK1	185 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	LRIG1	Q96JA1	1093 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	EYA3	Q99504	573 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	MAP3K14	Q99558	947 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	UNKL	Q9H9P5	680 aa	Known RBP	6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	SYBU	Q9NX95	663 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	CWC25	Q9NXE8	425 aa	Predicted RBP	6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	RNF186	Q9NXI6	227 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	CTTNBP2NL	Q9P2B4	639 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	FEZ2	Q9UHY8	353 aa	Predicted RBP	6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	NR2E3	Q9Y5X4	410 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	LAMB2	P55268	1798 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	LRRC37A	A6NMS7	1700 aa		6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	DDX60	Q8IY21	1712 aa	Known RBP	6.28	□□□□□ -1.4
PSMC6-208	ENST00000554956	UBE2Q2L	H0YL09	131 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	SLC16A6	O15403	523 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	CA12	O43570	354 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	OFD1	O75665	1012 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	MATN4	O95460	622 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	AHSG	P02765	367 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	VCAM1	P19320	739 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	PIK3CG	P48736	1102 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	VAV2	P52735	878 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	COL10A1	Q03692	680 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	PPP2R5A	Q15172	486 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	ATAT1	Q5SQI0	421 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	ARMC6	Q6NXE6	501 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	KSR2	Q6VAB6	950 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	RASAL3	Q86YV0	1011 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	ANKRD18A	Q8IVF6	992 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	CFAP52	Q8N1V2	620 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	CELF5	Q8N6W0	485 aa	Known RBP	6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	TNPO1	Q92973	898 aa	Known RBP	6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	CCDC136	Q96JN2	1154 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956		Q96MF0	132 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	CGRRF1	Q99675	332 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	BRD9	Q9H8M2	597 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	ANLN	Q9NQW6	1124 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	TMEM74B	Q9NUR3	256 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	PCDHA1	Q9Y5I3	950 aa		6.27	□□□□□ -1.41
PSMC6-208	ENST00000554956	AOX1	Q06278	1338 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	ANKRD36C	Q5JPF3	1778 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms