RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MYL4P12829 197 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ZFXP17010 805 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PAX3P23760 479 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 EEF1GP26641 437 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ADORA2AP29274 412 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 CARSP49589 748 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PPM1FP49593 454 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PDE6CP51160 858 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ITGA8P53708 1063 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ATXN1P54253 815 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 SOX10P56693 466 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 SATB1Q01826 763 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 NHLH1Q02575 133 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 EIF2B5Q13144 721 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 GRM1Q13255 1194 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 BMPR2Q13873 1038 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 E2F2Q14209 437 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PUM3Q15397 648 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 NPY5RQ15761 445 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 TBCCQ15814 346 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 CCDC38Q502W7 563 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 C4orf46Q504U0 113 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 TEDDM1Q5T9Z0 273 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 FCRL6Q6DN72 434 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 DPY19L2P1Q6NXN4 242 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ARHGEF25Q86VW2 580 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 SLC15A3Q8IY34 581 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ATRIPQ8WXE1 791 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 BRI3BPQ8WY22 251 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 MUL1Q969V5 352 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ZC3H10Q96K80 434 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 DHX36Q9H2U1 1008 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 IL17RBQ9NRM6 502 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ASB6Q9NWX5 421 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 LUZP4Q9P127 313 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PTGFRNQ9P2B2 879 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ARPP21Q9UBL0 812 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF212Q9UDV6 495 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 MID2Q9UJV3 735 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PADI4Q9UM07 663 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 SNX14Q9Y5W7 946 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 CDY1Q9Y6F8 540 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 LRRC3CA6NJW4 275 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 H7C4K7 107 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 ADAMTS3O15072 1205 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SLC16A3O15427 465 aaKnown RBP3.7□□□□□ -1.82
SCFD1-213ENST00000554776 THAP12O43422 761 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 RRP9O43818 475 aaKnown RBP3.7□□□□□ -1.82
SCFD1-213ENST00000554776 TTLL1O95922 423 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 IL6RP08887 468 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-213ENST00000554776 ACVR2AP27037 513 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 LIPAP38571 399 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 CLCN2P51788 898 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 INSCQ1MX18 579 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 PTCHD3Q3KNS1 767 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 PLAC9Q5JTB6 97 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 AKNAD1Q5T1N1 836 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF618Q5T7W0 954 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SYCE2Q6PIF2 218 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 USP49Q70CQ1 688 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF551Q7Z340 670 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-213ENST00000554776 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 ATG16L2Q8NAA4 619 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 IPO4Q8TEX9 1081 aaKnown RBP3.7□□□□□ -1.82
SCFD1-213ENST00000554776 CCT6BQ92526 530 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 GLG1Q92896 1179 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SARAFQ96BY9 339 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 TMEM41AQ96HV5 264 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 HERPUD2Q9BSE4 406 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SELENOOQ9BVL4 669 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 COLEC11Q9BWP8 271 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 TTLL2Q9BWV7 592 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SERTAD4Q9NUC0 356 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 ZSCAN32Q9NX65 697 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SLC39A10Q9ULF5 831 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 SH2B3Q9UQQ2 575 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 FER1L4A9Z1Z3 1794 aa3.7□□□□□ -1.82
SCFD1-213ENST00000554776 A0A087WZ62 844 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 FAM234BA2RU67 622 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 AQP12BA6NM10 295 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 PODXLO00592 558 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 FFAR2O15552 330 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 PLA2G6O60733 806 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 SRGAP2O75044 1071 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 C1RP00736 705 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 A1BGP04217 495 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 JUPP14923 745 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 GPD1P21695 349 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 IL1R2P27930 398 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 PDIA3P30101 505 aaKnown RBP3.69□□□□□ -1.82
SCFD1-213ENST00000554776 PTDSS1P48651 473 aaKnown RBP3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ALDH9A1P49189 494 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 CPT1AP50416 773 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 PRKAG1P54619 331 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 BCAT1P54687 386 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 GALNT1Q10472 559 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-213ENST00000554776 ARHGEF7Q14155 803 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 SLC29A2Q14542 456 aa3.69□□□□□ -1.82
SCFD1-213ENST00000554776 KRT72Q14CN4 511 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms