RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MTMR12Q9C0I1 747 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 DYRK4Q9NR20 520 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 SALL1Q9NSC2 1324 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 M0QYT0 321 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 BGNP21810 368 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 TCF7P36402 384 aaPredicted RBP14.42□□□□□ -0.1
VTI1B-204ENST00000554659 ATG4CQ96DT6 458 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 SELENONQ9NZV5 590 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 CEP170BQ9Y4F5 1589 aaPredicted RBP14.42□□□□□ -0.1
VTI1B-204ENST00000554659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.42□□□□□ -0.1
VTI1B-204ENST00000554659 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 MAP2K7O14733 419 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 KLRK1P26718 216 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 C2CD6Q53TS8 623 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 MRNIPQ6NTE8 343 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 UGT3A1Q6NUS8 523 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 IZUMO2Q6UXV1 221 aa14.42□□□□□ -0.1
VTI1B-204ENST00000554659 LINC00854A0A1B0GVQ3 168 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 TADA2AO75478 443 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 SKAP2O75563 359 aaPredicted RBP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 SUPT7LO94864 414 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 NPTXRO95502 500 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 HMBSP08397 361 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 GTF2H3Q13889 308 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 MAPRE1Q15691 268 aaKnown RBP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 HEATR4Q86WZ0 1026 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 GMCL1P1Q8NEA9 526 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 DUSP9Q99956 384 aaKnown RBP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 MPP6Q9NZW5 540 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 USP18Q9UMW8 372 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 TCRBV5S4A2TA0A5A2 114 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 DYNC1LI2O43237 492 aaPredicted RBP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 ARP10275 920 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 CHRM3P20309 590 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 PCNX4Q63HM2 1172 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 MPZL3Q6UWV2 235 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 KLHL25Q9H0H3 589 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 MUC3BQ9H195 1237 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 RUVBL2Q9Y230 463 aaKnown RBP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 CREG2Q8IUH2 290 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 WDR49Q8IV35 697 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 HDAC7Q8WUI4 952 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 EHD4Q9H223 541 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 RNF103O00237 685 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 FAM153BP0C7A2 387 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 SLC2A3P11169 496 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 PEX5P50542 639 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 LAMC2Q13753 1193 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 FAM153CQ494X1 144 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 TMPRSS6Q8IU80 811 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 C4orf19Q8IY42 314 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 FAM172AQ8WUF8 416 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 GJD4Q96KN9 370 aaPredicted RBP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 KCTD10Q9H3F6 313 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 WDCPQ9H6R7 721 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 SYBUQ9NX95 663 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 FAM153AQ9UHL3 310 aa14.41□□□□□ -0.1
VTI1B-204ENST00000554659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
VTI1B-204ENST00000554659 ZSCAN5CA6NGD5 496 aaPredicted RBP14.4□□□□□ -0.1
VTI1B-204ENST00000554659 CYP2C9P11712 490 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 CPA3P15088 417 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 TFE3P19532 575 aaPredicted RBP14.4□□□□□ -0.1
VTI1B-204ENST00000554659 RPL21P46778 160 aaKnown RBP14.4□□□□□ -0.1
VTI1B-204ENST00000554659 PWP1Q13610 501 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 PDPK2PQ6A1A2 396 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 DDIT4Q9NX09 232 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 EIF3LQ9Y262 564 aaKnown RBP14.4□□□□□ -0.1
VTI1B-204ENST00000554659 CFAP99D6REC4 459 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 DNALI1O14645 258 aaPredicted RBP14.4□□□□□ -0.1
VTI1B-204ENST00000554659 RPS6KA5O75582 802 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 GUCA1CO95843 209 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 F9P00740 461 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 TNFRSF8P28908 595 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 MCOLN2Q8IZK6 566 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 ABRAQ8N0Z2 381 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 DIABLOQ9NR28 239 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 SNX13Q9Y5W8 968 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 PMPCBO75439 489 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 FSBPO95073 299 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 CLPTM1O96005 669 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 RIN3Q8TB24 985 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 LRRC10BA6NIK2 292 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 VWA5AO00534 786 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 ATP9AO75110 1047 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 TWF1Q12792 350 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 CSTF3Q12996 717 aaKnown RBP14.4□□□□□ -0.1
VTI1B-204ENST00000554659 ZRANB3Q5FWF4 1079 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 NT5DC3Q86UY8 548 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 ZNF333Q96JL9 665 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 OSBPL10Q9BXB5 764 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 PCDHA3Q9Y5H8 950 aa14.4□□□□□ -0.1
VTI1B-204ENST00000554659 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SUPT20HL2P0C7V6 817 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 ADCK2Q7Z695 626 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 SLFN11Q7Z7L1 901 aa14.39□□□□□ -0.11
VTI1B-204ENST00000554659 CHSY1Q86X52 802 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms