RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 MYL4P12829 197 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 ENGP17813 658 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 PTH2RP49190 550 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 CLK3P49761 638 aaKnown RBP6.03□□□□□ -1.44
SCFD1-211ENST00000554437 GATMP50440 423 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 BRD3Q15059 726 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 ANKRD16Q6P6B7 361 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 WDR53Q7Z5U6 358 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-211ENST00000554437 GJA10Q969M2 543 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 UROC1Q96N76 676 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 VN1R3Q9BXE9 311 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 KLK15Q9H2R5 256 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 DUSP22Q9NRW4 184 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 DRG1Q9Y295 367 aaKnown RBP6.03□□□□□ -1.44
SCFD1-211ENST00000554437 MAN2B2Q9Y2E5 1009 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 H0YIZ8 118 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 SNX2O60749 519 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 PRKCBP05771 671 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 DLDP09622 509 aaKnown RBP6.02□□□□□ -1.45
SCFD1-211ENST00000554437 NTSR1P30989 418 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 ATICP31939 592 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 EEFSECP57772 596 aaKnown RBP6.02□□□□□ -1.45
SCFD1-211ENST00000554437 TIAL1Q01085 375 aaKnown RBP eCLIP6.02□□□□□ -1.452e-8■■□□□ 12.1
SCFD1-211ENST00000554437 ZNF362Q5T0B9 420 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-211ENST00000554437 MANEALQ5VSG8 457 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 CRTC1Q6UUV9 634 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 DPY19L3Q6ZPD9 716 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 Q6ZWC4 215 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 ARHGEF25Q86VW2 580 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 RAB11FIP4Q86YS3 637 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 RP9Q8TA86 221 aaKnown RBP6.02□□□□□ -1.45
SCFD1-211ENST00000554437 ZG16BQ96DA0 208 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 RSPRY1Q96DX4 576 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 SGCZQ96LD1 299 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 HIST1H2AAQ96QV6 131 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 DNAJB11Q9UBS4 358 aa6.02□□□□□ -1.45
SCFD1-211ENST00000554437 POLR2AP24928 1970 aaKnown RBP6.02□□□□□ -1.45
SCFD1-211ENST00000554437 A0A087WZ62 844 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 OVOL3O00110 214 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 AGPSO00116 658 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 AP4M1O00189 453 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 NPSP0C0P6 89 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 DRD4P21917 467 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 COPAP53621 1224 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 TIRAPP58753 221 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 TBC1D25Q3MII6 688 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 AARS2Q5JTZ9 985 aaKnown RBP6.01□□□□□ -1.45
SCFD1-211ENST00000554437 PCID2Q5JVF3 399 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 FANCBQ8NB91 859 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 ABHD11Q8NFV4 315 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 DEPTORQ8TB45 409 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 ZNF566Q969W8 418 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 KIAA1191Q96A73 305 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 TIMP4Q99727 224 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 EIF2AQ9BY44 585 aaKnown RBP6.01□□□□□ -1.45
SCFD1-211ENST00000554437 ZCWPW1Q9H0M4 648 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 SLC25A32Q9H2D1 315 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 PCDHGB2Q9Y5G2 931 aa6.01□□□□□ -1.45
SCFD1-211ENST00000554437 COQ9O75208 318 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 NDST3O95803 873 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 IDEP14735 1019 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 ABCB4P21439 1286 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 GPD1P21695 349 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 YY1P25490 414 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 EEF1GP26641 437 aaKnown RBP6□□□□□ -1.45
SCFD1-211ENST00000554437 CTGFP29279 349 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SOX10P56693 466 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 E2F1Q01094 437 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 BTKQ06187 659 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 CYP1B1Q16678 543 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SLC35G1Q2M3R5 365 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 XRRA1Q6P2D8 792 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 CLEC9AQ6UXN8 241 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SLC29A4Q7RTT9 530 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 AMIGO2Q86SJ2 522 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 MORC1Q86VD1 984 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SIRT6Q8N6T7 355 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 C11orf44Q8N8P7 122 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SNX27Q96L92 541 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 FAM227BQ96M60 508 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 PRR25Q96S07 402 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 MPHOSPH6Q99547 160 aaKnown RBP6□□□□□ -1.45
SCFD1-211ENST00000554437 SLITRK6Q9H5Y7 841 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 ZBTB26Q9HCK0 441 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SEMA4GQ9NTN9 838 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 SLC52A1Q9NWF4 448 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 C11orf21Q9P2W6 132 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 GABRQQ9UN88 632 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 ADAMTS5Q9UNA0 930 aa6□□□□□ -1.45
SCFD1-211ENST00000554437 EXOC5O00471 708 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 CES2O00748 559 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 PMPCBO75439 489 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 HNRNPCP07910 306 aaKnown RBP eCLIP5.99□□□□□ -1.453e-6■□□□□ 9.6
SCFD1-211ENST00000554437 WT1P19544 449 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-211ENST00000554437 ITPKBP27987 946 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 SERPINB3P29508 390 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 GKP32189 559 aa5.99□□□□□ -1.45
SCFD1-211ENST00000554437 INHBEP58166 350 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms