RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 OLFML1Q6UWY5 402 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 FAM183BPQ6ZVS7 135 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 ZNF564Q8TBZ8 553 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-210ENST00000553950 FNIP1Q8TF40 1166 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 TRMT2BQ96GJ1 504 aaKnown RBP15.24■□□□□ 0.03
SHMT2-210ENST00000553950 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 KCNK16Q96T55 309 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 NCAPGQ9BPX3 1015 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 NUP85Q9BW27 656 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 TTLL2Q9BWV7 592 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 ZDHHC7Q9NXF8 308 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 SCML2Q9UQR0 700 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TNFRSF10BO14763 440 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 PAPSS1O43252 624 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-210ENST00000553950 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
SHMT2-210ENST00000553950 XYLBO75191 536 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 CSPG5O95196 566 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 FGF19O95750 216 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TUBB4AP04350 444 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 KRT3P12035 628 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 ATF6P18850 670 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 YWHAQP27348 245 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 ARHGAP25P42331 645 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 NOP2P46087 812 aaKnown RBP15.23■□□□□ 0.03
SHMT2-210ENST00000553950 PPP3CCP48454 512 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 NAP1L1P55209 391 aaKnown RBP15.23■□□□□ 0.03
SHMT2-210ENST00000553950 DAOAP59103 153 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 DUSP6Q16828 381 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 DDR2Q16832 855 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 PPM1LQ5SGD2 360 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 PM20D1Q6GTS8 502 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 BEND5Q7L4P6 421 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TADA2BQ86TJ2 420 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 SYCE1Q8N0S2 351 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TTC9BQ8N6N2 239 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 LEMD2Q8NC56 503 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 CASP10Q92851 521 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 CDK5RAP1Q96SZ6 601 aaKnown RBP15.23■□□□□ 0.03
SHMT2-210ENST00000553950 ULBP1Q9BZM6 244 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TLE6Q9H808 572 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 LZTFL1Q9NQ48 299 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 MAN1C1Q9NR34 630 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TMEM30AQ9NV96 361 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 RRN3Q9NYV6 651 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 STAP1Q9ULZ2 295 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 SLC27A5Q9Y2P5 690 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 USP3Q9Y6I4 520 aa15.23■□□□□ 0.03
SHMT2-210ENST00000553950 TRIOBPQ9H2D6 2365 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 FAM92AA1XBS5 289 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 SIGLEC16A6NMB1 481 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 GOLGA8SH3BPF8 625 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-210ENST00000553950 DAB1O75553 588 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 SEC24AO95486 1093 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 TWF1Q12792 350 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 MAMLD1Q13495 774 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 C11orf63Q6NUN7 778 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-210ENST00000553950 SLC35G2Q8TBE7 412 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 FEZF2Q8TBJ5 459 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 FBXO32Q969P5 355 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 PSMG2Q969U7 264 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 FAM149B1Q96BN6 582 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 ARHGEF26Q96DR7 871 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 MCEEQ96PE7 176 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 GCNAQ96QF7 691 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 LACRTQ9GZZ8 138 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 CRISPLD1Q9H336 500 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 POPDC2Q9HBU9 364 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 TLR8Q9NR97 1041 aaKnown RBP15.22■□□□□ 0.03
SHMT2-210ENST00000553950 METTL5Q9NRN9 209 aaKnown RBP15.22■□□□□ 0.03
SHMT2-210ENST00000553950 IL37Q9NZH6 218 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 IP6K2Q9UHH9 426 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 ANAPC7Q9UJX3 599 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
SHMT2-210ENST00000553950 TCRBV5S1A1TA0A578 114 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 MACROD2A1Z1Q3 448 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 EPOPA6NHQ4 379 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 MYO1FO00160 1098 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 NCK2O43639 380 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 ZMYND10O75800 440 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 LTFP02788 710 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 MAN1A1P33908 653 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 ACAP1Q15027 740 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 PPP1R15BQ5SWA1 713 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 GPR153Q6NV75 609 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 GPRIN1Q7Z2K8 1008 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 MON1AQ86VX9 555 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 REXO1L1PQ8IX06 675 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 SLC22A17Q8WUG5 538 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 MYRFLQ96LU7 910 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 SFXN1Q9H9B4 322 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 OLA1Q9NTK5 396 aaKnown RBP15.21■□□□□ 0.03
SHMT2-210ENST00000553950 TRMT1Q9NXH9 659 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms