RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZNF366Q8N895 744 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 OR56A3Q8NH54 315 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 ADAMTS18Q8TE60 1221 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 SMCR8Q8TEV9 937 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 MAML1Q92585 1016 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 VN1R3Q9BXE9 311 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 TRIM5Q9C035 493 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 TPCN1Q9ULQ1 816 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 NOB1Q9ULX3 412 aaKnown RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 ZNF521Q96K83 1311 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 PYCARD-AS1I3L0S3 204 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 CD3EAPO15446 510 aaKnown RBP4.87□□□□□ -1.63
SCFD1-210ENST00000553693 RASSF9O75901 435 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 SCGB1D2O95969 90 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 TOP3BO95985 862 aaKnown RBP4.87□□□□□ -1.63
SCFD1-210ENST00000553693 ALDH5A1P51649 535 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-210ENST00000553693 SUMO3P55854 103 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-210ENST00000553693 PTCHD3Q3KNS1 767 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 PLEKHG6Q3KR16 790 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 SWSAP1Q6NVH7 229 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 APOA5Q6Q788 366 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 ZNF813Q6ZN06 617 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 PTCHD4Q6ZW05 846 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 MICU3Q86XE3 530 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 TCEAL8Q8IYN2 117 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 PRSS3P2Q8NHM4 247 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 PIGOQ8TEQ8 1089 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 NMD3Q96D46 503 aaKnown RBP4.87□□□□□ -1.63
SCFD1-210ENST00000553693 DHX36Q9H2U1 1008 aaKnown RBP4.87□□□□□ -1.63
SCFD1-210ENST00000553693 SACM1LQ9NTJ5 587 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 L1RE1Q9UN81 338 aa4.87□□□□□ -1.63
SCFD1-210ENST00000553693 PROB1E7EW31 1015 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 PPEF2O14830 753 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 DSCR3O14972 297 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 PRPF3O43395 683 aaKnown RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 RRP9O43818 475 aaKnown RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 BCAR3O75815 825 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 INMTO95050 263 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 IGKV2-30P06310 120 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 UQCRC1P31930 480 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 PTDSS1P48651 473 aaKnown RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 PSG6Q00889 435 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 DAZAP2Q15038 168 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 TRIP6Q15654 476 aaKnown RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 CNGA2Q16280 664 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 NFE2Q16621 373 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 ARHGAP29Q52LW3 1261 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 ZDHHC24Q6UX98 284 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 COL23A1Q86Y22 540 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 MAGEB6Q8N7X4 407 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 NGDNQ8NEJ9 315 aaKnown RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 ZNF668Q96K58 619 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 CCDC17Q96LX7 622 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 LRRC27Q9C0I9 530 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 ZCWPW1Q9H0M4 648 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 VPS16Q9H269 839 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 STK32BQ9NY57 414 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 DNMT3BQ9UBC3 853 aaKnown RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 CPNE7Q9UBL6 633 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 RGS17Q9UGC6 210 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-210ENST00000553693 HDAC9Q9UKV0 1011 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 USP19O94966 1318 aa4.86□□□□□ -1.63
SCFD1-210ENST00000553693 TCRBV5S1A1TA0A578 114 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 E5RJQ4 531 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 TMPRSS11DO60235 418 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 SFPQP23246 707 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCFD1-210ENST00000553693 ACVR2AP27037 513 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 IL1R2P27930 398 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 CCT4P50991 539 aaKnown RBP4.85□□□□□ -1.63
SCFD1-210ENST00000553693 TIRAPP58753 221 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 LMAN2Q12907 356 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 MAPK7Q13164 816 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 ARHGEF7Q14155 803 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 POLD3Q15054 466 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-210ENST00000553693 TMEM65Q6PI78 240 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 SRGAP1Q7Z6B7 1085 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 YAF2Q8IY57 180 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 IPCEF1Q8WWN9 437 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-210ENST00000553693 LRTOMTQ8WZ04 291 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 CUL5Q93034 780 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 HMCESQ96FZ2 354 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 ZNF48Q96MX3 618 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-210ENST00000553693 TMEM79Q9BSE2 394 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 STK31Q9BXU1 1019 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 FAM83DQ9H4H8 585 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 ASIC5Q9NY37 505 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 ELOVL5Q9NYP7 299 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 KLHL13Q9P2N7 655 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 TCEAL9Q9UHQ7 104 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 OGDHLQ9ULD0 1010 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 MAFFQ9ULX9 164 aa4.85□□□□□ -1.63
SCFD1-210ENST00000553693 SCAF8Q9UPN6 1271 aaKnown RBP4.85□□□□□ -1.63
SCFD1-210ENST00000553693 AQP7P3A6NL99 342 aa4.84□□□□□ -1.63
SCFD1-210ENST00000553693 H7C4K7 107 aa4.84□□□□□ -1.63
SCFD1-210ENST00000553693 MGEA5O60502 916 aa4.84□□□□□ -1.63
SCFD1-210ENST00000553693 PIAS2O75928 621 aa4.84□□□□□ -1.63
SCFD1-210ENST00000553693 MT-CO3P00414 261 aa4.84□□□□□ -1.63
SCFD1-210ENST00000553693 A1BGP04217 495 aa4.84□□□□□ -1.63
SCFD1-210ENST00000553693 CD19P15391 556 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms