RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TULP2O00295 520 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 DPYSL4O14531 572 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 TADA3O75528 432 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 ZBED1O96006 694 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 CKMP06732 381 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 USP17L7P0C7H9 530 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 PFKLP17858 780 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 GPD2P43304 727 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 PSEN1P49768 467 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 CDR2Q01850 454 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 RAB41Q5JT25 222 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 STXBP5Q5T5C0 1151 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 TXNDC8Q6A555 127 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 PMF1Q6P1K2 205 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 TRIM72Q6ZMU5 477 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 CCDC186Q7Z3E2 898 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 MON1AQ86VX9 555 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 MSANTD4Q8NCY6 345 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 IPO4Q8TEX9 1081 aaKnown RBP14.57□□□□□ -0.08
TUBB3-202ENST00000553656 STK32AQ8WU08 396 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 CPLX3Q8WVH0 158 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 BAP1Q92560 729 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 GOLGA1Q92805 767 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 SMARCD2Q92925 531 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 NXPE3Q969Y0 559 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 ULBP1Q9BZM6 244 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 TTYH3Q9C0H2 523 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 SYNCQ9H7C4 482 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 CNGB3Q9NQW8 809 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 SEPT11Q9NVA2 429 aaKnown RBP14.57□□□□□ -0.08
TUBB3-202ENST00000553656 IGSF9Q9P2J2 1179 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 CHORDC1Q9UHD1 332 aaPredicted RBP14.57□□□□□ -0.08
TUBB3-202ENST00000553656 DOCK6Q96HP0 2047 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 NOTCH4Q99466 2003 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 XIRP2A4UGR9 3374 aa14.57□□□□□ -0.08
TUBB3-202ENST00000553656 GREB1Q4ZG55 1949 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 PIK3R2O00459 728 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 NRG2O14511 850 aaPredicted RBP14.56□□□□□ -0.08
TUBB3-202ENST00000553656 SART1O43290 800 aaKnown RBP14.56□□□□□ -0.08
TUBB3-202ENST00000553656 FBXO21O94952 628 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 LSM8O95777 96 aaKnown RBP14.56□□□□□ -0.08
TUBB3-202ENST00000553656 CFHP08603 1231 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 RALAP11233 206 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 HDCP19113 662 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 TUBP50607 506 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 PDCLQ13371 301 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 FAM78AQ5JUQ0 283 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 HECTD3Q5T447 861 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 TADA2BQ86TJ2 420 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 VSTM4Q8IW00 320 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
TUBB3-202ENST00000553656 E2F7Q96AV8 911 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 ZSWIM3Q96MP5 696 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 ASB16Q96NS5 453 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 SLC46A2Q9BY10 475 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 CYLDQ9NQC7 956 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 NAGPAQ9UK23 515 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 NOCTQ9UK39 431 aaKnown RBP14.56□□□□□ -0.08
TUBB3-202ENST00000553656 CAPN11Q9UMQ6 739 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 LUC7L2Q9Y383 392 aaKnown RBP14.56□□□□□ -0.08
TUBB3-202ENST00000553656 USP3Q9Y6I4 520 aa14.56□□□□□ -0.08
TUBB3-202ENST00000553656 MYO16Q9Y6X6 1858 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 C2orf78A6NCI8 922 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 MMEP08473 750 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 ZBED6P86452 979 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 HTR4Q13639 388 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
TUBB3-202ENST00000553656 SNX30Q5VWJ9 437 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 RSRC2Q7L4I2 434 aaKnown RBP14.55□□□□□ -0.08
TUBB3-202ENST00000553656 RNF135Q8IUD6 432 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 ARID3BQ8IVW6 561 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-202ENST00000553656 CMTM8Q8IZV2 173 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 ARL14EPQ8N8R7 260 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-202ENST00000553656 SLC20A1Q8WUM9 679 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 DDX1Q92499 740 aaKnown RBP14.55□□□□□ -0.08
TUBB3-202ENST00000553656 PPP1R13BQ96KQ4 1090 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 CDK5RAP1Q96SZ6 601 aaKnown RBP14.55□□□□□ -0.08
TUBB3-202ENST00000553656 MIS12Q9H081 205 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 AIPL1Q9NZN9 384 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 NUMBLQ9Y6R0 609 aa14.55□□□□□ -0.08
TUBB3-202ENST00000553656 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 E5RJQ4 531 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 ANHXE9PGG2 379 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 TLR5O60602 858 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 ECI2O75521 394 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 GYPCP04921 128 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 ASGR2P07307 311 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 ZDHHC11BP0C7U3 371 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 MBL2P11226 248 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-202ENST00000553656 WEE1P30291 646 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 YWHAGP61981 247 aaKnown RBP eCLIP14.54□□□□□ -0.08
TUBB3-202ENST00000553656 KLHL30Q0D2K2 578 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 NAA35Q5VZE5 725 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 PM20D1Q6GTS8 502 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 PARM1Q6UWI2 310 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 YAF2Q8IY57 180 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 SCML4Q8N228 414 aa14.54□□□□□ -0.08
TUBB3-202ENST00000553656 IRGQQ8WZA9 623 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms