RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 IFNAR2P48551 515 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 NHLH1Q02575 133 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 STILQ15468 1287 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 DPCR1Q3MIW9 517 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 TADA2BQ86TJ2 420 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 C1orf210Q8IVY1 113 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 ATP2A3Q93084 1043 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 MED15Q96RN5 788 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 NACA2Q9H009 215 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 MTF2Q9Y483 593 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-204ENST00000553324 PCDHB4Q9Y5E5 795 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 HHLA1C9JL84 531 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 H0Y858 1186 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 LEFTY2O00292 366 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 MBL2P11226 248 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-204ENST00000553324 CD19P15391 556 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 KIF11P52732 1056 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 TNK2Q07912 1038 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 USP4Q13107 963 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 LRRC32Q14392 662 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 ANGPT1Q15389 498 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 GBP6Q6ZN66 633 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 RBM43Q6ZSC3 357 aaKnown RBP16.18■□□□□ 0.18
SHMT2-204ENST00000553324 IRF2BP1Q8IU81 584 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 CPA6Q8N4T0 437 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 UBR7Q8N806 425 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 ATOH1Q92858 354 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-204ENST00000553324 CDK5RAP1Q96SZ6 601 aaKnown RBP16.18■□□□□ 0.18
SHMT2-204ENST00000553324 INTS2Q9H0H0 1204 aaKnown RBP16.18■□□□□ 0.18
SHMT2-204ENST00000553324 EBF3Q9H4W6 596 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 LMAN1LQ9HAT1 526 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 GMIPQ9P107 970 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 NDRG2Q9UN36 371 aaKnown RBP16.18■□□□□ 0.18
SHMT2-204ENST00000553324 CPQQ9Y646 472 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 USP3Q9Y6I4 520 aa16.18■□□□□ 0.18
SHMT2-204ENST00000553324 SHISA7A6NL88 538 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 COCHO43405 550 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 NFATC1O95644 943 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 CTHP32929 405 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
SHMT2-204ENST00000553324 BCAT1P54687 386 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 MFAP3P55082 362 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 CNGA2Q16280 664 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 MAN2A1Q16706 1144 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 EXOC3L4Q17RC7 722 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 DGKKQ5KSL6 1271 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 KLHDC10Q6PID8 442 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 RRAGAQ7L523 313 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 CCDC186Q7Z3E2 898 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 ARHGAP18Q8N392 663 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 SYNPOQ8N3V7 929 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 ZNF276Q8N554 614 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 TTC16Q8NEE8 873 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 UBE2TQ9NPD8 197 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-204ENST00000553324 CYLDQ9NQC7 956 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 HPS4Q9NQG7 708 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 TBC1D14Q9P2M4 693 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 TSPAN16Q9UKR8 245 aa16.17■□□□□ 0.18
SHMT2-204ENST00000553324 E2F8A0AVK6 867 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 XPO1O14980 1071 aaKnown RBP16.16■□□□□ 0.18
SHMT2-204ENST00000553324 LAMTOR5O43504 91 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 TLR5O60602 858 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 SETSIPP0DME0 302 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 RALAP11233 206 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 GOLGA8FQ08AF8 430 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 GOLGA8DPQ0D2H9 430 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 BST2Q10589 180 aaKnown RBP16.16■□□□□ 0.18
SHMT2-204ENST00000553324 FZD5Q13467 585 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 PPP2R5DQ14738 602 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 TRIM68Q6AZZ1 485 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 LCLAT1Q6UWP7 414 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 ZNF687Q8N1G0 1237 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 TTC8Q8TAM2 541 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
SHMT2-204ENST00000553324 OTUB2Q96DC9 234 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 ANO10Q9NW15 660 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 SPATA6Q9NWH7 488 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-204ENST00000553324 CLIC5Q9NZA1 410 aa16.16■□□□□ 0.18
SHMT2-204ENST00000553324 PTPRDP23468 1912 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 O00370 1275 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
SHMT2-204ENST00000553324 CHRNB1P11230 501 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 SOX9P48436 509 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 ZXDBP98169 803 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 GRSF1Q12849 480 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHMT2-204ENST00000553324 GOLGA7BQ2TAP0 167 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 EML3Q32P44 896 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 VWA3BQ502W6 1294 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 RAB41Q5JT25 222 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 CCDC183Q5T5S1 534 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 TRIM65Q6PJ69 517 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 GPRIN1Q7Z2K8 1008 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 PIGZQ86VD9 579 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 TTC30AQ86WT1 665 aa16.15■□□□□ 0.18
SHMT2-204ENST00000553324 ADGRG2Q8IZP9 1017 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms