RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MMS19Q96T76 1030 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 MRPL45Q9BRJ2 306 aaKnown RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 ZNF518BQ9C0D4 1074 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 CAPN10Q9HC96 672 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 OLFML3Q9NRN5 406 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 CALCOCO1Q9P1Z2 691 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 SLC6A14Q9UN76 642 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 CEP192Q8TEP8 1941 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 PKD1L2Q7Z442 2459 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 CACNA1EQ15878 2313 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PI4KAP42356 2102 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 IGHV1OR15-9A0A0B4J2B8 117 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 TRIM24O15164 1050 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 COCHO43405 550 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 OPHN1O60890 802 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PRPF6O94906 941 aaKnown RBP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 TNNC2P02585 160 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 CAPNS1P04632 268 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 NEFLP07196 543 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 CD59P13987 128 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 WASP42768 502 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PPP3CCP48454 512 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 ZNF33AQ06730 810 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 BYSLQ13895 437 aaKnown RBP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 C10orf76Q5T2E6 689 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 TDRD10Q5VZ19 366 aaKnown RBP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 RAB44Q7Z6P3 723 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PROSER1Q86XN7 944 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 DDX42Q86XP3 938 aaKnown RBP eCLIP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 MIB1Q86YT6 1006 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 CBWD2Q8IUF1 395 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 SLC41A1Q8IVJ1 513 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 ETFBKMTQ8IXQ9 262 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 CEP76Q8TAP6 659 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 WBP2Q969T9 261 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 CAMK1GQ96NX5 476 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 SLITRK1Q96PX8 696 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 DPEP3Q9H4B8 488 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PPP4R2Q9NY27 417 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 EHD2Q9NZN4 543 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 TBC1D14Q9P2M4 693 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 HCN2Q9UL51 889 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 R3HCC1Q9Y3T6 440 aaKnown RBP9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 PCNX2A6NKB5 2137 aa9.67□□□□□ -0.86
SYNE2-209ENST00000553308 E2F8A0AVK6 867 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 FRMD3A2A2Y4 597 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 FAM221BA6H8Z2 402 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 TBC1D3BA6NDS4 549 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 H0Y626 953 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 CLDN5O00501 218 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 HOXC11O43248 304 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-209ENST00000553308 TULP3O75386 442 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 TRIM16O95361 564 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 HOXB2P14652 356 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 GNL1P36915 607 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-209ENST00000553308 GAD2Q05329 585 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 ALCAMQ13740 583 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 RABEP1Q15276 862 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 ZNF423Q2M1K9 1284 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 RRAGBQ5VZM2 374 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 EGFLAMQ63HQ2 1017 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 C19orf48Q6RUI8 117 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 SLC36A4Q6YBV0 504 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 SV2BQ7L1I2 683 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 BRAPQ7Z569 592 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 TERB1Q8NA31 727 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 OR6B3Q8NGW1 331 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 FBXO32Q969P5 355 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 HSPA12BQ96MM6 686 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 CLIC6Q96NY7 704 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 ACOX2Q99424 681 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 ELOVL4Q9GZR5 314 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 SNX25Q9H3E2 840 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 CD93Q9NPY3 652 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 FBXO2Q9UK22 296 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-209ENST00000553308 CYP8B1Q9UNU6 501 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 CLIC4Q9Y696 253 aa9.66□□□□□ -0.86
SYNE2-209ENST00000553308 ADAMTS20P59510 1910 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 A0A087X0B3 334 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 A0A1W2PQF6 199 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 SH3BP5O60239 455 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 GJB3O75712 270 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 IRF1P10914 325 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 PTPN1P18031 435 aaKnown RBP9.65□□□□□ -0.86
SYNE2-209ENST00000553308 NDUFV2P19404 249 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 YWHAQP27348 245 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 NTSR1P30989 418 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 RDXP35241 583 aaKnown RBP9.65□□□□□ -0.86
SYNE2-209ENST00000553308 SCAPQ12770 1279 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 DUOXA2Q1HG44 320 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 ANO4Q32M45 955 aa9.65□□□□□ -0.86
SYNE2-209ENST00000553308 BTBD8Q5XKL5 378 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms