RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 AATKQ6ZMQ8 1374 aa5.79□□□□□ -1.48
SCFD1-209ENST00000553280 ITIH6Q6UXX5 1313 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 C1QTNF3-AMACRE9PGA6 284 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 H0Y3Z8 333 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 J3KTA2 159 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 ZSCAN9O15535 394 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 GPANK1O95872 356 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 TK1P04183 234 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 CSF1RP07333 972 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 APOBEC3AP31941 199 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 ELF1P32519 619 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 PRKAA2P54646 552 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 EIF5P55010 431 aaKnown RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 HHEXQ03014 270 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 CCNIQ14094 377 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 GRM4Q14833 912 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 NFRKBQ6P4R8 1299 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 C1orf122Q6ZSJ8 110 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 RAB11FIP2Q7L804 512 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 POLNQ7Z5Q5 900 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 CLNKQ7Z7G1 428 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 MBD3L2Q8NHZ7 208 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 WDR60Q8WVS4 1066 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 WWC2-AS2Q96NR7 200 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 DCLRE1CQ96SD1 692 aaKnown RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 ZCWPW1Q9H0M4 648 aa5.78□□□□□ -1.48
SCFD1-209ENST00000553280 TMX4Q9H1E5 349 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 ZFR2Q9UPR6 939 aaKnown RBP5.78□□□□□ -1.48
SCFD1-209ENST00000553280 PRAMEF33A0A0G2JMD5 474 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 PNMA6EA0A0J9YXQ4 647 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 A0A1W2PS29 197 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAM90A18PA6NE21 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAM90A16PA6NEW6 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 A6NLC8 198 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAM90A9PA6NNJ1 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAM90A5PA8MXJ8 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 GOLGA6L6A8MZA4 724 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 PATE3B3GLJ2 98 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 TOR1BO14657 336 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 PRAMEF10O60809 474 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 ZNF623O75123 536 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 CD4P01730 458 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAM90A15PP0C7V4 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAM90A14PP0C7W9 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 JUPP14923 745 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 KLRK1P26718 216 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 PRKAR1BP31321 381 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 UQCRC1P31930 480 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 NDUFV1P49821 464 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 GATMP50440 423 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 TUBP50607 506 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 CDK7P50613 346 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 VAMP2P63027 116 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 HSD11B2P80365 405 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 ZXDAP98168 799 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 MC2RQ01718 297 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 OCA2Q04671 838 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FHL3Q13643 280 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 HLXQ14774 488 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-209ENST00000553280 CERCAMQ5T4B2 595 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 ARHGAP40Q5TG30 622 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 FAAH2Q6GMR7 532 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 RINT1Q6NUQ1 792 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 ANKS1BQ7Z6G8 1248 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 SLC15A3Q8IY34 581 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 CPT1CQ8TCG5 803 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 Q8TCH9 128 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 CSGALNACT1Q8TDX6 532 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 COG8Q96MW5 612 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 HIST1H2AAQ96QV6 131 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 ZSWIM1Q9BR11 485 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 VPS16Q9H269 839 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 C19orf53Q9UNZ5 99 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-209ENST00000553280 SSX2IPQ9Y2D8 614 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 TCAF1Q9Y4C2 921 aa5.77□□□□□ -1.49
SCFD1-209ENST00000553280 EFCAB8A8MWE9 144 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 ADM5C9JUS6 153 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 F5H697 171 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 ZNF185O15231 689 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 FOXS1O43638 330 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TRIAP1O43715 76 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 SNX2O60749 519 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TAF5LO75529 589 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 HGFP14210 728 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 ZEB1P37275 1124 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-209ENST00000553280 NPTX2P47972 431 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 CCR5P51681 352 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 PGDP52209 483 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 SEC24CP53992 1094 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 RNASE9P60153 205 aaKnown RBP5.76□□□□□ -1.49
SCFD1-209ENST00000553280 RPS7P62081 194 aaKnown RBP5.76□□□□□ -1.49
SCFD1-209ENST00000553280 UBE3AQ05086 875 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TRPC3Q13507 836 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TTC22Q5TAA0 569 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 ICE2Q659A1 982 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 RGS7BPQ6MZT1 257 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-209ENST00000553280 RINLQ6ZS11 566 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 MICALCLQ6ZW33 695 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 RRAGAQ7L523 313 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 SGMS1Q86VZ5 419 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms