RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 NDRG1Q92597 394 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 ADAM2Q99965 735 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 RSAD1Q9HA92 442 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 DDX20Q9UHI6 824 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 ZNF638Q14966 1978 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 SYNJ2BP-COX16A0A087WUM0 186 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 CAND2O75155 1236 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 BEST1O76090 585 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 NUDT17P0C025 328 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 PECAM1P16284 738 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 PTPN1P18031 435 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 WARSP23381 471 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 RABGGTBP53611 331 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 ATXN1P54253 815 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 GDF10P55107 478 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 CAV1Q03135 178 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 CCSAPQ6IQ19 270 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 DRICH1Q6PGQ1 229 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 RHBDF2Q6PJF5 856 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 NPNTQ6UXI9 565 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 PIGZQ86VD9 579 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 ZC3H18Q86VM9 953 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 ZDHHC17Q8IUH5 632 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 FUKQ8N0W3 1084 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 BBOF1Q8ND07 529 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 CMASQ8NFW8 434 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 SPATA18Q8TC71 538 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 EPS8L3Q8TE67 593 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 RSAD2Q8WXG1 361 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 COX16Q9P0S2 106 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 DCDC2CA8MYV0 355 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 MCF2LO15068 1137 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 ITGAVP06756 1048 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 ACLYP53396 1101 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 EIF3EP60228 445 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 MAGOHP61326 146 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 GUCY1A3Q02108 690 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 DPYSL3Q14195 570 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 LPIN1Q14693 890 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 KYNUQ16719 465 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 FAM182AQ5T1J6 154 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 C1orf228Q6PIY5 440 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 CYP4V2Q6ZWL3 525 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 CCHCR1Q8TD31 782 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 GLT1D1Q96MS3 346 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 SNRNP25Q9BV90 132 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 KRT82Q9NSB4 513 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 EFR3BQ9Y2G0 817 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 GIT1Q9Y2X7 761 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 APOC4-APOC2K7ER74 178 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 DPYSL4O14531 572 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 DNALI1O14645 258 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 XPO1O14980 1071 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 B3GAT3O94766 335 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 APOC2P02655 101 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 RPLP2P05387 115 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 RBP3P10745 1247 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 NPR3P17342 541 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 HOXD10P28358 340 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 ACTN2P35609 894 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 ACADSBP45954 432 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 HDAC4P56524 1084 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 MAP3K7CLP57077 242 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 CA9Q16790 459 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 HP1BP3Q5SSJ5 553 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 KDM7AQ6ZMT4 941 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 SLC26A9Q7LBE3 791 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 MAP7D3Q8IWC1 876 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 SLC35B2Q8TB61 432 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 P3H4Q92791 437 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 NKD2Q969F2 451 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 C9orf72Q96LT7 481 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 RBM15Q96T37 977 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 HNRNPABQ99729 332 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 SYT15Q9BQS2 421 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 DUSP16Q9BY84 665 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 LRRC4Q9HBW1 653 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 DRG1Q9Y295 367 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 HEY1Q9Y5J3 304 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 GOLGA8MH3BSY2 632 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 RGS16O15492 202 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 RAB27AP51159 221 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 NRLP54845 237 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 NKX3-2P78367 333 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 PTK7Q13308 1070 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 ZSCAN26Q16670 478 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 LONRF1Q17RB8 773 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 BOLA3Q53S33 107 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 KIAA0319Q5VV43 1072 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 TRMT10CQ7L0Y3 403 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 LIMS2Q7Z4I7 341 aa9.49□□□□□ -0.89
RAB3IP-218ENST00000553099 RPAINQ86UA6 219 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms