RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SLC46A2Q9BY10 475 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 SMOC2Q9H3U7 446 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 TRPC7Q9HCX4 862 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 GMIPQ9P107 970 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 SCML2Q9UQR0 700 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 HEPACAM2A8MVW5 462 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 F8VZ95 297 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 DPYSL4O14531 572 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 CYP26A1O43174 497 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 NARSO43776 548 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 CKMP06732 381 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 PSMC3P17980 439 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 VIPR2P41587 438 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 UBXN1Q04323 297 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 PDE4CQ08493 712 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 FCHO2Q0JRZ9 810 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 RAPGEF1Q13905 1077 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 SYCP1Q15431 976 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 LUZP1Q86V48 1076 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 MFSD6LQ8IWD5 586 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 CELF5Q8N6W0 485 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 C1QTNF1Q9BXJ1 281 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 PLA2G2FQ9BZM2 168 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 EPHX3Q9H6B9 360 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 TLR8Q9NR97 1041 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 FAM207AQ9NSI2 230 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 TDP1Q9NUW8 608 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
TRAFD1-209ENST00000552896 F5P12259 2224 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 THAP12O43422 761 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 TCF3P15923 654 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 USP8P40818 1118 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 PSEN1P49768 467 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 KLK7P49862 253 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 SLC7A9P82251 487 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 PFKPQ01813 784 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 SCML4Q8N228 414 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 ST13P5Q8NFI4 369 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 DNASE1L2Q92874 299 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 USP13Q92995 863 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 SECISBP2LQ93073 1101 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 SLC22A12Q96S37 553 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 TRMT61BQ9BVS5 477 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 TSPY26PQ9H489 355 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 C11orf16Q9NQ32 467 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
TRAFD1-209ENST00000552896 A0A1B0GTH6 734 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 GOLGA6L19H0YKK7 550 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 M0R296 226 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 TULP2O00295 520 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 EPHB6O15197 1021 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 GPR37L1O60883 481 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 CALCAP01258 141 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 HDCP19113 662 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 TKTL1P51854 596 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 JAM2P57087 298 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 BPIFB4P59827 614 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 PTK2Q05397 1052 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 ADIGQ0VDE8 80 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 GRM2Q14416 872 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 ZNF77Q15935 545 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 HECTD3Q5T447 861 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 YAF2Q8IY57 180 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 SIX6OS1Q8N1H7 587 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 ARHGAP18Q8N392 663 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 KIAA1958Q8N8K9 716 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 ARL14EPQ8N8R7 260 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 BPIFB1Q8TDL5 484 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 SLC35F5Q8WV83 523 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 ZNF606Q8WXB4 792 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 SMG9Q9H0W8 520 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 BRD9Q9H8M2 597 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 LRRC4Q9HBW1 653 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 TRPV5Q9NQA5 729 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 CYLDQ9NQC7 956 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 FBXL21Q9UKT6 434 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 PCDHGC3Q9UN70 934 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
TRAFD1-209ENST00000552896 A0A1W2PQC6 194 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 PRR33A8MZF0 331 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms