RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	RALA	P11233	206 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	CSF2RA	P15509	400 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	IL1R2	P27930	398 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	DAOA	P59103	153 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	RBM10	P98175	930 aa	Known RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	KLF1	Q13351	362 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	DHX34	Q14147	1143 aa	Known RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	NFE2	Q16621	373 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	SLC39A12	Q504Y0	691 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	ZFYVE27	Q5T4F4	411 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	FAM171A1	Q5VUB5	890 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	MFSD7	Q6UXD7	560 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	MAATS1	Q7Z4T9	603 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	ZDHHC14	Q8IZN3	488 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	SCML4	Q8N228	414 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	FAM172A	Q8WUF8	416 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	HDAC7	Q8WUI4	952 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	CENPI	Q92674	756 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	TOP1MT	Q969P6	601 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	RNF25	Q96BH1	459 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	SLC2A13	Q96QE2	648 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	KCNK16	Q96T55	309 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	HERPUD2	Q9BSE4	406 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	RHOBTB2	Q9BYZ6	727 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	OSBPL8	Q9BZF1	889 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	GPR62	Q9BZJ7	368 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	ULBP1	Q9BZM6	244 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	CWH43	Q9H720	699 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	KLHL11	Q9NVR0	708 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	PCSK1N	Q9UHG2	260 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	PTPRD	P23468	1912 aa		13.29	□□□□□ -0.28
CACNB3-223	ENST00000552480	hCG_1818297	A0A087WSY0	165 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	LRRD1	A4D1F6	860 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	FAM187A	A6NFU0	413 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	C3orf70	A6NLC5	250 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	PRPSAP2	O60256	369 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	MATK	P42679	507 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	CDKN2B	P42772	138 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	FNTA	P49354	379 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	NDUFV1	P49821	464 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	WDR5	P61964	334 aa	Known RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	YWHAZ	P63104	245 aa	Known RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	MRPS25	P82663	173 aa	Known RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	ATP11A	P98196	1134 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	SLC7A5	Q01650	507 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	CDO1	Q16878	200 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	MAP9	Q49MG5	647 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	CTXN3	Q4LDR2	81 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	SH3PXD2A	Q5TCZ1	1133 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	TMCO3	Q6UWJ1	677 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	GPRIN1	Q7Z2K8	1008 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	UBE2Q1	Q7Z7E8	422 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	CEP57	Q86XR8	500 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	IFT20	Q8IY31	132 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	TNS4	Q8IZW8	715 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	TEKT4	Q8WW24	435 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	IRGQ	Q8WZA9	623 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	RAPGEF5	Q92565	580 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	MAGOHB	Q96A72	148 aa	Known RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	FAM149B1	Q96BN6	582 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	ZNF689	Q96CS4	500 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	PEBP4	Q96S96	227 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	TBCB	Q99426	244 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	LRRC19	Q9H756	370 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	RC3H2	Q9HBD1	1191 aa	Known RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	POPDC2	Q9HBU9	364 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	NGRN	Q9NPE2	291 aa	Known RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	GDF3	Q9NR23	364 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	HOMER3	Q9NSC5	361 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	PCYOX1	Q9UHG3	505 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	AMACR	Q9UHK6	382 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	EFR3B	Q9Y2G0	817 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	CENPF	P49454	3210 aa		13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	COL4A4	P53420	1690 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNB3-223	ENST00000552480	VWA8	A3KMH1	1905 aa		13.27	□□□□□ -0.28
CACNB3-223	ENST00000552480	NT5C1B-RDH14	C9J2C7	533 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZMYND10	O75800	440 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZBED1	O96006	694 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	OR4Q2	P0C623	313 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	KDELR1	P24390	212 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	NOS2	P35228	1153 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	COIL	P38432	576 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ALDH7A1	P49419	539 aa	Known RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	SULT1E1	P49888	294 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	CDR1	P51861	262 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	RABGGTB	P53611	331 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	HDAC4	P56524	1084 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	DEFB103A	P81534	67 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	DR1	Q01658	176 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	GUCY2D	Q02846	1103 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	TAZ	Q16635	292 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	SMTNL2	Q2TAL5	461 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLC25A52	Q3SY17	297 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	RAB6C	Q53S08	254 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	BOLA3	Q53S33	107 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms