RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TAOK1Q7L7X3 1001 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 EXOC3L1Q86VI1 746 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 MAP7D3Q8IWC1 876 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 UNC45BQ8IWX7 931 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 TOP6BLQ8N6T0 577 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 ZNF473Q8WTR7 871 aaKnown RBP14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 TNIP3Q96KP6 325 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 RNF157Q96PX1 679 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 TBCBQ99426 244 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 SELENOSQ9BQE4 189 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 CCDC77Q9BR77 488 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 CA12O43570 354 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 PGK1P00558 417 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 FAM163BP0C2L3 166 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 RBP3P10745 1247 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CHN1P15882 459 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 PTPN9P43378 593 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 STAT4Q14765 748 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ERMARDQ5T6L9 678 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 SLC26A9Q7LBE3 791 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ARCQ7LC44 396 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 RSPH3Q86UC2 560 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 OSTM1Q86WC4 334 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 PPIL6Q8IXY8 311 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 SPATA18Q8TC71 538 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 SLC2A14Q8TDB8 520 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 TRIB2Q92519 343 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 PRCCQ92733 491 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 HSFY1Q96LI6 401 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 TTC25Q96NG3 672 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 XPO6Q96QU8 1125 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ST3GAL5Q9UNP4 418 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 TLL2Q9Y6L7 1015 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ALOX15BO15296 676 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CAPN15O75808 1086 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 LCP1P13796 627 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 IL4RP24394 825 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ATP5DP30049 168 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CTCFP49711 727 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 FCGRTP55899 365 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 HDAC4P56524 1084 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ZC3H12AQ5D1E8 599 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CYP4F22Q6NT55 531 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 NPNTQ6UXI9 565 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 VSIG1Q86XK7 387 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CLEC4CQ8WTT0 213 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CENPIQ92674 756 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 P3H4Q92791 437 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 ZFP42Q96MM3 310 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 C11orf84Q9BUA3 381 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 SNRNP25Q9BV90 132 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 SPC25Q9HBM1 224 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 PCDH18Q9HCL0 1135 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 GPATCH2LQ9NWQ4 482 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 LGALS13Q9UHV8 139 aa14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 RRP15Q9Y3B9 282 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-216ENST00000552199 CYB561D2O14569 222 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 MDM4O15151 490 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 RDXP35241 583 aaKnown RBP14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 NKX3-2P78367 333 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 CCDC38Q502W7 563 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 CENPUQ71F23 418 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 SRLQ86TD4 932 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 NAT8LQ8N9F0 302 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 FAM71DQ8N9W8 422 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 B3GALNT2Q8NCR0 500 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 CPT1BQ92523 772 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 ARHGEF2Q92974 986 aaKnown RBP14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 WNT8BQ93098 351 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 ARHGAP39Q9C0H5 1083 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 SENP6Q9GZR1 1112 aaPredicted RBP14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 CHST12Q9NRB3 414 aa14.63□□□□□ -0.07
RAB3IP-216ENST00000552199 A0A087WUV0 522 aaPredicted RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 MEIS3P2A8K0S8 358 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 XPO1O14980 1071 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 CHRNA1P02708 482 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 TFE3P19532 575 aaPredicted RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 TKTP29401 623 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 STIP1P31948 543 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 ROR1Q01973 937 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 CA9Q16790 459 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 ANKRD20A8PQ5CZ79 823 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 DARS2Q6PI48 645 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 SERINC5Q86VE9 423 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 PLD5Q8N7P1 536 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 ATXN2LQ8WWM7 1075 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 ZIC5Q96T25 663 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 PHACTR1Q9C0D0 580 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 FAM105AQ9NUU6 356 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 SLC38A7Q9NVC3 462 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 CTNNAL1Q9UBT7 734 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 ZNF487B1APH4 448 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 GABRDO14764 452 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 SEPT4O43236 478 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms