RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NUDT18Q6ZVK8 323 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 RABEPKQ7Z6M1 372 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 WDR49Q8IV35 697 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 PDZD8Q8NEN9 1154 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 KCNV2Q8TDN2 545 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 OTUB2Q96DC9 234 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 ELOVL4Q9GZR5 314 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 TMEM74BQ9NUR3 256 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 MBD1Q9UIS9 605 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 FBXO2Q9UK22 296 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 PILRBQ9UKJ0 227 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 SLC6A14Q9UN76 642 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 PCNX2A6NKB5 2137 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 ATXN2Q99700 1313 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 NBEAQ8NFP9 2946 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 CACNA1EQ15878 2313 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 ITPR1Q14643 2758 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 E2F8A0AVK6 867 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 TBC1D3BA6NDS4 549 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 H0Y626 953 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 HYAL3O43820 417 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 TACC1O75410 805 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 TRIM16O95361 564 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 RPL6Q02878 288 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 GAD2Q05329 585 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 GFPT1Q06210 699 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 DUOXA1Q1HG43 343 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 EMC10Q5UCC4 262 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 PEAR1Q5VY43 1037 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 SLC36A4Q6YBV0 504 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 PIP4P1Q86T03 277 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 C12orf40Q86WS4 652 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 SFTPA1Q8IWL2 248 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 CCDC65Q8IXS2 484 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 FRMD1Q8N878 549 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 OR6B3Q8NGW1 331 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 GTPBP2Q9BX10 602 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 KIAA1586Q9HCI6 787 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 MSRB2Q9Y3D2 182 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 CLIC4Q9Y696 253 aa15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 MYO18AQ92614 2054 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-210ENST00000551981 ADAMTS9Q9P2N4 1935 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 SPAARA0A1B0GVQ0 90 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 VPS37CA5D8V6 355 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 ZBTB24O43167 697 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 ADAM23O75077 832 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 RTN3O95197 1032 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 FAM163BP0C2L3 166 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 CHRM1P11229 460 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 PTPN1P18031 435 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 ITPKAP23677 461 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 YWHAQP27348 245 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 TNNC1P63316 161 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 MESP2Q0VG99 397 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 IFRD2Q12894 506 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 SEMA3BQ13214 749 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 C8orf34Q49A92 452 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 LY6G5CQ5SRR4 150 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 TRAPPC11Q7Z392 1133 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 CBWD2Q8IUF1 395 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 ZNF513Q8N8E2 541 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 OVCA2Q8WZ82 227 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 CLIC6Q96NY7 704 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 MRPL45Q9BRJ2 306 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 FGFBP2Q9BYJ0 223 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 ZDHHC4Q9NPG8 344 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 HSPBP1Q9NZL4 362 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 DEC1Q9P2X7 70 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 SH3BP1Q9Y3L3 701 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
CHMP1A-210ENST00000551981 LAMA5O15230 3695 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 OPHN1O60890 802 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 CD2BP2O95400 341 aaKnown RBP15.08■□□□□ 0
CHMP1A-210ENST00000551981 SERPINF2P08697 491 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 TNNI1P19237 187 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 PDCP20941 246 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 HNRNPDQ14103 355 aaKnown RBP15.08■□□□□ 0
CHMP1A-210ENST00000551981 HECTD3Q5T447 861 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 NUP93Q8N1F7 819 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 FBXO32Q969P5 355 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 ZNF518BQ9C0D4 1074 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 KLK13Q9UKR3 277 aa15.08■□□□□ 0
CHMP1A-210ENST00000551981 FASNP49327 2511 aaKnown RBP15.07■□□□□ 0
CHMP1A-210ENST00000551981 A8MXQ7 604 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 HOXC11O43248 304 aaPredicted RBP15.07■□□□□ 0
CHMP1A-210ENST00000551981 TULP3O75386 442 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 DLATP10515 647 aaKnown RBP15.07■□□□□ 0
CHMP1A-210ENST00000551981 CACNA2D1P54289 1103 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 SNRNP35Q16560 246 aaKnown RBP15.07■□□□□ 0
CHMP1A-210ENST00000551981 WDR72Q3MJ13 1102 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 C10orf76Q5T2E6 689 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 SDE2Q6IQ49 451 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 ETFBKMTQ8IXQ9 262 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 PHTF2Q8N3S3 785 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 NAT16Q8N8M0 369 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 PANK2Q9BZ23 570 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 LRRC27Q9C0I9 530 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms